Pseudomonas coronafaciens pv. oryzae: POR16_11030
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Entry
POR16_11030 CDS
T08147
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_11030 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcof02044
]
POR16_11030 (tssB)
Secretion system [BR:
pcof02044
]
Type VI secretion system
Imp/Vas secretion system core components
POR16_11030 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QGL56850
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All DBs
Position
2424258..2424755
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AA seq
165 aa
AA seq
DB search
MAKEGSVAPKERINVTFKPAVGGAQEEVELPLKLLVLGDFTQRADGRKLEERKAISIDKN
NFDDVMAKQELEILLSVPDRLQSKDDAGDLAFSIKVGSMKDFNPASLVEQIPELKKLMEL
RNALMALKGPLGNTPAFRKAIENVLADEESRHKVMNELGMDTAAQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggttctgtggcacccaaagaaaggattaacgtcaccttcaagcccgct
gtcggaggagcgcaggaggaagtagagctcccattaaaactattggtcctgggcgatttc
acacagcgcgccgatggccggaagctcgaagagcgtaaggctatcagcatcgacaagaat
aacttcgatgatgtcatggccaagcaagaacttgaaattttactgagtgttcctgatcgc
ctgcaatctaaagatgatgctggtgatctggctttcagcatcaaggtcgggtcgatgaaa
gactttaatccggccagcctggtggaacaaattcccgagcttaaaaagttgatggaacta
cgcaacgccttgatggcacttaaagggccactcgggaatacgcctgcttttcgtaaggca
atcgagaacgttctggctgacgaagagtcgcgccataaagtaatgaatgagctgggcatg
gatacggcagcacagtag
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