Pseudomonas coronafaciens pv. oryzae: POR16_17380
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Entry
POR16_17380 CDS
T08147
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcof03016
]
POR16_17380 (truD)
Enzymes [BR:
pcof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
POR16_17380 (truD)
Transfer RNA biogenesis [BR:
pcof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
POR16_17380 (truD)
Prokaryotic type
POR16_17380 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
QGL57982
LinkDB
All DBs
Position
complement(3880579..3881637)
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AA seq
352 aa
AA seq
DB search
MTELELLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVPLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAQNETLQILKTGRHRR
KLQRGAHAANGFTLRLTRLDADKDALNQRLETIVRQGIPNYFGAQRFGYQGGNLGEARDY
ASRQALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWQQAQVGDLLAFTDSRSFFPAGP
DECSDPRLAILDLHPTGPQWGEGPSPAGGVTAELENTIASDESALRDWLIRAGMEHERRI
LRLPIGRLTWHYPESDILQLEFVLPPGCFATVLVRELVDLVPVGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctggggccaagggcctacggtgatgcgctgggcagtgctgtc
ctcaaggctacagctgaagattttcaggtggacgaagtactggacatccccctgtcgggc
gatggcgagcatttgtggttgtgggtcgagaagcgcggcctgaataccgaggaggctgcc
cgccgactggcacgggcagcgggcgttccgttgcgcacggtcagctacgccggtttgaag
gatcgtcaggcgctgactcgtcaatggttcagcattcaactgcccggcaaggctgaccct
gatctttccgcggcccagaacgagaccctgcagattctcaagaccggccggcatcggcgc
aagctgcagcgcggcgctcacgcagccaacggcttcacactcaggctgacccgtctggat
gcggacaaggacgcattgaatcagcgtctcgagaccattgtccgacagggcatacccaat
tatttcggtgctcagcgtttcggttatcagggcggtaacctgggtgaagcccgtgattat
gccagccgtcaggcgctgcctgagcagcgtgcagtgcgctcgcgtctgttgtccacggcg
cgtagctacctgttcaatcgggtgcttgcggcccgtgtggccgatggcagctggcagcaa
gctcaggtaggcgatctgctggcgttcaccgacagccggagcttttttccggccgggcct
gacgagtgcagcgacccgcggctggcgattctcgatctgcatcccacgggcccgcagtgg
ggtgaaggcccttcgccagctggcggcgtcaccgcagagctggaaaacaccatcgccagc
gacgaatccgcactgcgcgactggctgatcagggccggcatggagcacgaacgtcgcatc
ctgcgactgcccatcgggcggctgacgtggcattatcccgagtctgacattctgcaactg
gaattcgtccttccgcccggatgcttcgccactgttttggtgcgtgaactcgtggatctg
gtgccggttgggcagacggacagctcatgcgtattctga
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