Segatella copri: LK433_12460
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Entry
LK433_12460 CDS
T07933
Name
(GenBank) dCMP deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pcoi
Segatella copri
Pathway
pcoi00240
Pyrimidine metabolism
pcoi01100
Metabolic pathways
pcoi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LK433_12460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcoi02044
]
LK433_12460
Enzymes [BR:
pcoi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LK433_12460
Secretion system [BR:
pcoi02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LK433_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
APOBEC_N
Bd3614-deam
SNAD4
APOBEC4_like
APOBEC2
APOBEC3
NAD1
XOO_2897-deam
NAD2
APOBEC1
APOBEC4
Motif
Other DBs
NCBI-ProteinID:
UEA42760
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All DBs
Position
2958771..2959223
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AA seq
150 aa
AA seq
DB search
MANELSKQTKLDLRYLRMARIWAENSYCKRRQVGALVVKDKMIISDGYNGTPSGFENVCE
DNNVTKPYVLHAEANAITKLARSSNNSEGSTLYVTASPCIECAKLIIQSGIKRVVYAEKY
RLDDGIKLMQRAGIKVEYLNPDEKTSSVED
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgaactttccaaacaaaccaagctcgaccttcgctatttgcgaatggcacgt
atatgggctgaaaacagctattgcaaacgccgacaggtaggtgcactggttgtaaaagat
aaaatgattatcagtgatggctacaacggtacaccgagcggatttgaaaatgtctgtgag
gataacaacgtaaccaagccatacgttctccatgcggaggctaatgctattacgaaactg
gctcgcagcagcaataacagtgagggaagtacgctttacgtcaccgcctctccatgtata
gaatgtgccaaactgatcatacagtcgggcatcaagcgtgttgtatatgcagagaaatac
cgtctggacgatggtatcaaactgatgcaacgggcaggaatcaaggtagaatacctcaat
cctgatgaaaagacatcttctgtagaagattag
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