Prevotella communis: L6468_03525
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Entry
L6468_03525 CDS
T09070
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcou
Prevotella communis
Brite
KEGG Orthology (KO) [BR:
pcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcou03009
]
L6468_03525 (rlmD)
Enzymes [BR:
pcou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L6468_03525 (rlmD)
Ribosome biogenesis [BR:
pcou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L6468_03525 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Met_10
Methyltransf_25
MTS
PCMT
N6_N4_Mtase
TRAM
Methyltransf_11
PrmA
UPF0020
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UKK62850
LinkDB
All DBs
Position
complement(912680..914113)
Genome browser
AA seq
477 aa
AA seq
DB search
MARSKKPLPLLEGVTIEAVAAEGKCLFHWNDLVVFVPFCVPGDVCDIQIRRKKHSFAEGE
VVRFVEYSKVRAVPFCKHFGVCGGCKWQNLPYEEQLKFKQQQVFDQLHRIGKVELPEFRT
ILGSVKTQEYRNKLDFGCANKRYLTKEEITALPKDESQSLKDVPAIGFHITGAFDKILPI
EKCWLMDDLHNQIRNDIRDYAMEHGISFFDLRAQVGLLRDIIIRNSASGELMVIIQFHYD
ETGGEKEALDLLQHVADTFPQITSLLYLDNQKCNDTIGDQDILVFKGTDHIFELMEDLKF
KVGPKSFYQTNTEQAYHLYSVAREFAGLTGNEMVYDLYTGTGTIANFVAKKAKQVIGIEY
VPEAIEDAKINSEINGISNTLFYAGDMKDILTDDFIAEHGRPDVIITDPPRAGMHPDVVK
TILRAAPDRIVYVSCNPATQARDLQDLDEQYKVIEVQPVDMFPHTPHVENVVLLKKR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagcaagaaaccattacccctgttagaaggcgttaccattgaggctgttgct
gccgaaggtaaatgcctgttccactggaacgacctggtggtcttcgtaccattctgcgtg
cctggtgacgtttgcgacatccagattcgccgcaagaagcactcttttgccgagggcgag
gtggtgcgctttgtagaatacagcaaggtgcgcgccgttcctttttgcaagcacttcggt
gtatgcggtggatgcaaatggcagaacctgccctatgaagaacagttgaagttcaagcag
cagcaagtatttgaccagctacaccgtatcggcaaagtagaactgcccgagttccgcact
attctcgggtctgtaaagactcaggagtatcgtaacaagctggacttcggttgtgccaac
aaacgttacctgacgaaagaggaaattacggcactgcctaaggatgagagtcagagcctg
aaggatgtgcccgccatcggtttccatatcacaggtgctttcgataagatactgcctatc
gagaagtgctggctgatggacgacctgcataatcagattcgcaatgacatccgcgactac
gccatggagcacggcatatcgttcttcgacctgcgcgctcaggttggtctgttgcgtgac
atcattatccgcaatagcgccagtggtgagttgatggtgattatccagttccactatgat
gagacgggcggcgaaaaagaagcactcgacctgttgcaacacgtagccgacaccttccca
cagatcacgtccttactctacctcgacaaccaaaagtgcaatgacaccattggcgatcag
gacatcctcgtgttcaagggtacagaccatatctttgagctcatggaagacctgaagttc
aaagtaggtccaaagtcattctatcagaccaacaccgagcaggcctaccacctttacagt
gtagcacgtgagttcgcaggattgacaggcaacgagatggtctacgacctctacaccggc
acaggaaccattgccaacttcgttgccaagaaagccaagcaggtgattggtatcgagtat
gtgccagaggctatcgaggatgcaaaaatcaactccgagataaatggcatcagcaacacc
ctgttctatgctggcgatatgaaggatatcctcaccgacgattttatcgcagagcacgga
cgtccagatgtcatcatcaccgaccccccacgtgccggtatgcatccagacgttgtgaag
actattctgcgcgcagcccccgaccgcattgtatatgtatcgtgcaaccctgccacacaa
gctcgcgacctgcaggatttggacgagcagtacaaggtgatagaggtgcaacccgtagat
atgtttcctcacaccccacatgtggagaatgtagtcttattgaagaaaagataa
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