KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_00900
Entry
JM49_00900        CDS       T03338                                 
Name
(GenBank) type VI secretion protein VasK
  KO
K11891  type VI secretion system protein ImpL
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025  Biofilm formation - Pseudomonas aeruginosa
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_00900
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_00900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_00900
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_00900
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical SRC-1 7tm_7
Other DBs
NCBI-ProteinID: AIS10270
LinkDB
Position
196157..199684
AA seq 1175 aa
MKNFFKKVGAFLRKTWVWTLLLVLFMALLVWFVGPLLAVNDYKFWESATSRLLTISVLFL
IWGLTMVFVSWRAGIRKKEMEDSEDGQERLRREELIDEEQKELRSRFKEAMRTLKTSSLY
RGRSERWRNDLPWYLLIGPQSSGKTSLLDFSGLEFPINKIDRKLTRDTIGTRHCDWYFAD
HGVLIDTAGRYLTQPDAEVDGSAWSTLLNLLRKRRRGRPLNGVLVTIPVELLLSGNEQDL
DTLARQVRARLQDVHQKLHVDVPVYLVLSKADQLLGFDEFFDQLSREESDQVLGTSFRKE
QNGTDVAVLRQEFEELLRRLNSQVIMRMHQERDTQRRGRILDFPHQLGQIGERLCLFVDM
AFTGNRYQRASQLRGFYLTSAPHLTEKLDPDTAGIGASLGMAAGVLPTLRSGRSRFIHHL
LSRVIFPEADLAGLDKRERNRIHWGQRALYVGALVALALFGLLWAGGFSANYERLENLRS
LAQNWNQQRTALTARDDAMAALKTLDTSFEATKVFPAKGDVSLHERVGLYQGEESNPVVL
SAYERELQAQLLPRVAQMLEGQIRSNMRDRDRLLNSLRAYLMLNMQDRRDPSWLKDWVAS
DWSTRYAGNTAVQNGLNAHFERLLKLPFSYPLNDTLVAQARQVLRSESLANVVYRVLREQ
ARSLPEYRLSQHLGPQGSLFVGTDYAIPGFYTQQGYQQYFSVQGTALVTDILRDNWVLGE
GSGISGMDLRRLMVELEQLYFRDYANFWSEAVGQVGLQPFNDAGEGADQVAGLTSANSPV
LQLLVEVRENTRFQAIAESAEDVTAAADKAAEKGGALGKVAAAAAGKAQEALAKNLPDTA
KKSLQRRFEPLHRLLDDNNGPAADLTPALQALNDLQLQLAGLARASAPEQAAFEMAKTRM
SGQRDALSSLRNASVRLPRPVSVWFNVLAEDTWRLVLNDSYQYLNQRYQSELYSFYGKAI
SKRYPFSAHSTSDVAISDFREFFKAQGIADRFFETYMRPFVSGDPGNYRLRSIDGHSLPM
SKVYLDQMAAAQVIRQSFFSENPAEPQVQFKLEPYTLDPAVSRSEFRFGDKTMEYRHGPI
VPVSFKWPTDAEDGRTSLVLDKMAGRPVGIEKNTGPWSLFRLFDLMQTEYLTGRDVLVLK
ADLGGLRANYLLMSQRTPNPFDMGVLRTFRMPVQL
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgaaaaacttcttcaagaaagtcggcgccttcctgcgcaagacgtgggtctggacgctg
ttgctggtgctgttcatggcgctgctggtgtggttcgtcgggccgctgctggcggtcaac
gactacaaattctgggaaagcgcgacctcgcgcctgctgaccatcagcgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgccgggatccgcaagaaagaaatg
gaagacagcgaagacggccaggaacgcctgcgccgtgaagagctgatcgacgaggaacag
aaagagctgcgcagccgcttcaaggaagccatgcgcaccctcaagacctccagcctgtac
cgcgggcgcagcgagcgctggcgcaacgacctgccgtggtacctgctgatcggcccgcag
agcagcggcaagaccagcctgctggacttctcgggccttgagttcccgatcaacaagatc
gaccgcaagctgacccgcgacaccatcggcacccggcattgcgactggtacttcgccgac
cacggcgtgctgatcgacaccgccggccgctacctgacccagcccgacgcggaagtcgac
ggcagcgcctggagcaccttgctcaacctgttgcgcaagcgccgtcgcgggcgtccgctc
aacggcgtgctggtgaccattccggtggagctgctgctgagtggcaacgagcaggatctc
gacaccctggcgcgccaggtccgcgcgcgcctgcaggacgtgcaccagaagctgcacgtc
gacgtgccggtgtacctggtgctgagcaaggccgaccaactgctgggcttcgacgaattc
ttcgaccaactgagccgcgaggaaagcgaccaggtactcggcaccagcttccgcaaggaa
cagaacggcaccgacgtcgccgtgctgcgccaggagttcgaagagctgctgcgccgcctg
aacagccaggtgatcatgcgcatgcaccaggagcgcgacacccagcgccgtggtcgcatc
ctcgatttcccgcaccagctgggccagatcggcgagcgcctgtgcctgttcgtcgacatg
gcattcaccggcaaccgctaccagcgggccagccagctacgcggtttctacctgaccagc
gcgccgcacctgacggaaaaactcgaccccgataccgccggcatcggcgccagcctgggc
atggcggccggcgtgctgccgaccttgcgcagcggtcgttcgcgcttcattcaccacctg
ctgagccgggtgattttccccgaggccgacctggcgggcctggacaagcgcgagcgcaat
cgcatccattggggccagcgtgcgctgtacgtcggcgcgctggtggccctggccttgttc
ggcctgctctgggcgggcggtttctccgccaactacgagcgcctggaaaacctgcgctcc
ctggcgcagaactggaaccagcagcgcaccgcgctgaccgcccgcgacgacgcgatggcg
gcgctcaagaccctcgacaccagcttcgaagccaccaaggtattcccggccaagggcgac
gtttcgctgcacgagcgggtcggcctgtaccagggcgaggaaagcaacccggtggtgctc
agcgcctacgagcgtgagctgcaagcgcagctgctgccacgggtggcgcagatgctggaa
gggcagatccgcagcaacatgcgcgaccgcgaccgcctgctcaacagcctgcgggcgtac
ctgatgctgaacatgcaggaccgtcgcgatccgtcctggctcaaggactgggtagccagc
gactggtcgacgcgctacgccggcaacaccgcggtgcagaacggcctgaacgcgcacttc
gaacgcctgctcaagctgccgttcagctacccgctcaacgacaccctggtggcccaggcg
cgccaggtgctgcgcagcgagtcgctggccaacgtggtctaccgcgtgctgcgcgaacag
gcgcggagcctgccggagtaccgcctgagccaacacctggggccgcagggcagcctgttc
gtcggcaccgactacgcgatcccgggtttctacacccagcagggttaccagcagtatttc
tcggtccagggcacggcgctggtcaccgacatcctgcgtgacaactgggtgctgggcgaa
ggcagcggcatcagcggcatggacctgcgccgcctgatggtggagctggaacagctgtac
ttccgcgactacgccaacttctggagcgaagcggtcggccaggtcggcctgcaaccgttc
aacgacgctggcgagggcgccgatcaggtcgccggcctgacttcggccaactcgccggtg
ctgcaactgctggtggaggtacgtgagaacacccgcttccaggccatcgccgaaagcgcc
gaagacgtgaccgccgcggcggacaaggccgccgagaagggcggggcgttgggcaaggtc
gcggcggctgccgcgggcaaggcccaggaagccctggccaagaacctgccggacaccgcg
aagaagtcgctgcaacgtcgcttcgaaccgctgcaccgcctgctggacgacaacaacggc
ccggccgctgacctgacgccggcgctgcaagcgctgaacgacctgcaactgcaactggcc
ggcctggcccgtgccagcgcgcccgagcaggcggcgttcgagatggccaagacccgcatg
agcggccagcgcgatgccctgagcagcctgcgcaacgcctcggtgcgcctgccgcgtccg
gtgagcgtgtggttcaacgtgctggcggaagacacctggcgcctggtgctcaacgactct
taccagtacctcaaccagcgttatcagagcgagctgtacagcttctacggcaaggccatc
agcaagcgttatccgttcagcgcccacagcaccagcgatgtcgccatcagcgacttccgc
gagttcttcaaggcgcaaggcatcgccgatcgcttcttcgaaacctacatgcggcctttc
gtcagcggcgatccgggcaactaccgcctgcgcagcatcgatggccacagcctgccgatg
tccaaggtctacctcgaccagatggccgcggcccaggtgatccgccagagcttcttctcg
gagaacccggcggagccgcaggtgcagttcaagctggagccctacaccctggacccggcg
gtgagccgctccgagttccgtttcggcgacaagaccatggaataccgccacggcccgatc
gtaccggtgtccttcaagtggccgaccgatgccgaagacggccgcaccagcctggtgctg
gacaagatggccgggcgcccggtgggcatcgaaaagaacaccggcccctggtcgctgttc
cgcctgttcgacctgatgcagaccgagtacctgaccggccgtgacgtgctggtgctcaag
gccgacctgggcggcctgcgcgccaactacctgctgatgagccagcgcacgccgaacccg
ttcgacatgggcgtgctgcgcaccttccgcatgccggtgcagctctga

DBGET integrated database retrieval system