KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_00915
Entry
JM49_00915        CDS       T03338                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_00915
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_00915
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_00915
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: AIS10273
LinkDB
Position
201495..203561
AA seq 688 aa
MFNPSNETHFSLTVDDFQGDLQVLSFEGIEGISQPFRFDLELVSENPDLDLETLLHKQAF
LAFDPQGSGIHGQIYRVAQGDAGKRLTRYKVSLVPQLAYLEHRTNQRIYQQLSAPKIIAL
ILEEHGIQGNAYQFQLGTPCPDRDYCVQYDETDLHFIQRLCEEEGLHYHFQHSPQGHLLV
FGDDQTVFPKLGQPTAYIQGSGMVADEPVIKGFNLRLETRTRRTTRRDYDFEKPRLQLEA
AYKPEAESEEPDLEDYDYPGRFTDRARGKFLSQRALERRRADYQQAEGWGDQTRLVSGHF
LELSEHPRSEWNDLWLLTHIVHEGKQPQVLEESVTSDTTDNKDDFHQGYRNRFLATPWQV
FYRPALNHPKPRVLGSQTAVVTGPKGEEIHCDQYGRVKVQFHWDREGKADDKTSCWLRVS
SSWAGDRYGAIVIPRIGMEVLVTFLEGDPDQPLITGCLYHKEHPVPYALPANKTRTVFKS
MSSPGGAGYNELRIEDKKGAEQIFIHAQRDWDENIEHDQKIRIGHERHDTVEKNTYTELK
AEEHRITHADRKTETRVDDHLTVGENQHIKLGTAQLTKAGQEIHLKAGAKMVIEAGSELT
IKAGGSFIKLDAGGVTVVGPVVKINAGGSAGSGTGIGIKPPGLPGAADKDVAGDLPVVAP
SNIPMPPPPVCKECLARAKRNSQALAAR
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgttcaatccttccaatgaaacccacttcagcctgacggtcgacgacttccagggtgac
ttgcaggtgctgtctttcgaagggatcgaaggcatcagccagccgttccgtttcgatctg
gagctggtcagcgagaaccccgacctggacctggagacgctgctgcacaagcaggctttt
ctagcgtttgatccgcaaggcagtggcatccacggccagatctaccgcgtggcccagggc
gatgccggcaagcgcctgacccgctacaaggtgtcgctggtgccgcagctggcctacctc
gagcaccgtaccaaccagcgcatctaccagcagctgtcggcgccgaagatcatcgccctg
atcctcgaagagcacggcatccagggcaacgcctaccagttccagctcggcaccccgtgc
ccggaccgcgactactgcgtgcagtacgacgaaaccgacctgcacttcatccagcgcctg
tgcgaagaggaaggcctgcattaccacttccagcacagcccgcaaggccacctgctggtg
ttcggcgacgaccagacggtgttccccaagctcggccagcccaccgcctatatccagggc
agcggcatggtcgccgacgagccagtgatcaagggtttcaacctgcgcctggaaacccgc
acccgccgcaccacccgccgcgactacgacttcgagaaaccgcgcctgcaactggaagcg
gcctataaacccgaggctgaaagcgaagaaccggacctggaggactacgattacccgggc
cgtttcaccgaccgtgcgcgcggcaagttcctcagccagcgcgccctcgaacgccgccgc
gccgactaccagcaggccgaaggctggggcgaccagacacgactggtcagcggccatttc
ctggaactgtccgagcacccgcgcagcgagtggaacgacctgtggctgctgacccatatc
gtccacgaaggcaagcagccgcaggtgctggaagagtcggtgaccagcgacaccaccgac
aacaaggatgacttccaccagggctatcgcaaccgcttcctcgccacgccctggcaggtg
ttctaccgtccggccctgaaccacccgaaaccgcgggtgctgggcagccagaccgcggtg
gtcaccgggcccaagggcgaagaaatccactgcgaccagtacggccgcgtgaaggtgcag
ttccactgggaccgcgaaggcaaagccgacgacaagaccagctgctggctgcgcgtgtcc
tctagctgggccggcgaccgctacggcgccatcgtcatcccgcgcatcggcatggaagta
ctggtgaccttcctcgagggcgaccccgaccagccgctgatcaccggctgcctgtaccac
aaggaacacccggtgccttacgccctgccggcgaacaagacccgtaccgtcttcaagtcc
atgagctcccccggcggcgccggctacaacgaactgcgcatcgaagacaaaaaaggcgcc
gaacagatcttcatccacgcccagcgcgactgggacgagaacatcgaacacgaccagaaa
atccgcatcggccacgaacgccacgacacggtggagaagaacacctacaccgaactcaag
gccgaagaacaccgcatcacccacgccgaccgcaagaccgaaacccgcgtcgacgaccac
ctgaccgtgggcgaaaaccagcacatcaaactcggcaccgcgcaactgaccaaagccggc
caggaaatccacctcaaggccggcgccaagatggtgatcgaagccggcagcgaactgacg
atcaaggccggggggagttttatcaaactcgatgccggcggcgtcacggtggtggggccg
gtggtgaagatcaatgcggggggctcggcggggagtgggacggggattgggatcaagccg
ccggggttgccgggggcggcggataaggatgtggccggtgatctgccggtggttgcgccg
agcaacataccgatgccaccgccaccggtgtgcaaggaatgcctggcccgggccaaacgt
aacagccaagccctggcggcacgctaa

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