Pseudomonas citronellolis: PcP3B5_20300
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Entry
PcP3B5_20300 CDS
T04637
Symbol
ybiS
Name
(GenBank) putative L,D-transpeptidase YbiS precursor
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcq01002
]
PcP3B5_20300 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcq01011
]
PcP3B5_20300 (ybiS)
Peptidases and inhibitors [BR:
pcq01002
]
Cysteine peptidases
Family C82
PcP3B5_20300 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PcP3B5_20300 (ybiS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
FAS_meander
Motif
Other DBs
NCBI-ProteinID:
AMO75482
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All DBs
Position
2194915..2195889
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AA seq
324 aa
AA seq
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MLSRVIAACSLSFAALLSAGPVSALELPLPAPGEDIVGQVQVIKAKYEDTFADLGQTYDL
GYQEMLAANPGVDAWLPGVGTEVIIPTRFILPPGPREGIVINIAEYRLYYFPKGKNVVYT
YPLGIGREGWGSPIAHTSIVAKTKDPAWYPPASIRAEHAADGDPLPTVVPPGPDNPLGPF
KMSLGVPGYLIHGSNKKFGIGTRTSHGCFRMYNGDVTELFPMVPVGTSVRIINEPYKFGR
SEGKIYLEAHTPIDDHGNPSVVDKHTAVINALLKREDIANQMQMDWNVVREVVAAEDGLP
VAIAMPQQPGSSVAASENTTVQMP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgtgttatcgccgcctgctcgctgtcttttgccgcgctgctctcggccggc
cccgtttccgccctcgagctgccgctgccggcgcccggcgaggatatcgtcggccaggtg
caggtcatcaaggccaagtacgaagacaccttcgccgacctcggccagacctatgacctg
ggctaccaggagatgctcgccgccaacccgggcgtcgacgcctggctgcccggcgtgggc
accgaggtcatcatcccgacgcgcttcatcctgccgccgggcccgcgcgaaggcatcgtg
atcaacatcgccgagtaccgcctgtactacttccccaaaggcaagaacgtggtctacacc
tacccgctgggtatcggccgcgagggctggggctcgcccatcgcccacaccagcatcgtc
gccaagaccaaggacccggcctggtacccgccggcgtcgatccgcgccgagcacgccgcc
gacggcgacccgctgccgaccgtggtgccgccggggccggacaacccgctgggcccgttc
aagatgtcgctgggcgttcccggctacctgatccacggctcgaacaagaagttcggcatc
ggcacccgcaccagccacggttgcttccgcatgtacaacggcgacgtgaccgagctgttc
ccgatggtgccggtgggcacttcggtgcgcatcatcaacgagccgtacaagttcggccgc
agcgaaggcaagatctacctcgaggcccatacgccgatcgacgaccacggcaacccctcg
gtcgtggataagcacaccgcggtgatcaacgcgctgctcaagcgtgaagacatcgccaac
cagatgcagatggactggaacgtggtgcgcgaagtggtggcggccgaagacggcctgccg
gtggccatcgccatgccgcagcagcccggttcctcggtggctgccagcgagaacaccacc
gtgcagatgccctga
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