Porphyromonas crevioricanis: NCTC12858_01252
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Entry
NCTC12858_01252 CDS
T05510
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcre03009
]
NCTC12858_01252 (rluD_1)
Enzymes [BR:
pcre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NCTC12858_01252 (rluD_1)
Ribosome biogenesis [BR:
pcre03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC12858_01252 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
SQH73397
UniProt:
A0A2X4PZX7
LinkDB
All DBs
Position
1:1443794..1444894
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AA seq
366 aa
AA seq
DB search
MFVEESERVSVPDSDLDEDLDWDSEQLADTSTPLYEHYRFVADPGQTPVRADKFLFDRIG
RISRNRIQLAAEAGCVFAGDNPIRSSYKVKPGDVLTIRMERPRNELEILPEDISLDIVYE
DDSLLVVNKAAGMVVHPGHGNFTGTLLNALAYYLRHDNNFDPTDPRLGLVHRIDKDTSGL
LVIAKNPDTKTHLSRQFFNKTTQRTYRALAWGRFEEKEGTIEGNIGRDLRNRTVMAVYPP
NSEEGKPAVTHYSVLEEMAFVSWIECRLETGRTHQIRAHMSHIGHPLFSDEKYGGTCILR
GNNTPKYRQFINNCFDICPRQALHAKTLGFEHPITGQWMSFDSELPTDLEKLLLRWQAYT
QTLFDK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagaagaatctgaaagagtcagtgttccggattcggatttggatgaagatctg
gattgggattccgagcaactagccgatacatctacccctctctacgagcattaccggttt
gttgccgacccaggacagactcctgtccgtgccgacaaatttttgttcgataggataggg
cgtatttcccgcaatcgtatacagttagcagccgaagcaggctgcgtatttgctggtgat
aatcctatccgtagcagttataaggtaaagccaggggatgtgctgactatccggatggaa
cgccctcggaatgaactggagatacttccggaagatatatctctggatatagtatatgaa
gacgattcgcttttggtggtaaataaggcagccgggatggtggtgcatccgggacacggc
aattttaccgggactttgctcaatgccttggcttattatctgcgtcatgataacaatttc
gatcctaccgatcccaggttaggcttagtacaccgtatagacaaggatacatccggattg
cttgttattgccaaaaatccagataccaaaacacatctgtcgaggcagtttttcaacaaa
acgacacaacgaacttaccgagctcttgcttggggacgatttgaggagaaagagggaacc
atagagggaaatatcggtcgagacttgcgtaacagaaccgttatggctgtttatcccccg
aattcagaagaaggaaaaccggctgtcacacattatagtgtgttggaggaaatggccttt
gtcagctggatagaatgtcgtttggaaactggtcgtacgcatcagatacgcgctcacatg
agtcatataggacaccctctattttcagacgaaaaatatggcggtacttgtatattgaga
gggaataatacacctaagtatcgccaattcatcaataattgtttcgatatttgtcctcgt
caggctttgcatgccaagactttgggttttgaacatccgattacaggccaatggatgagt
ttcgactcggaattacctacggatttagaaaaactcctcttgcgttggcaggcctataca
caaactctttttgataaatga
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