Phascolarctos cinereus (koala): 110197316
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Entry
110197316 CDS
T05867
Gene name
RARB
Definition
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05200
Pathways in cancer
pcw05222
Small cell lung cancer
pcw05223
Non-small cell lung cancer
pcw05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110197316 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
110197316 (RARB)
05222 Small cell lung cancer
110197316 (RARB)
05223 Non-small cell lung cancer
110197316 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110197316 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcw03310
]
110197316 (RARB)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110197316 (RARB)
Nuclear receptors [BR:
pcw03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
110197316 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110197316
NCBI-ProteinID:
XP_020826757
UniProt:
A0A6P5IXA1
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Position
Unknown
AA seq
517 aa
AA seq
DB search
MTIRINYRLLAVLSVIIHDSGLGKGPAAQRAKKGAELDGVGWTSPVPPASPPLEDKALLQ
TFSRERGETMFDCMDVLAVSPGQILDFYTASPSSCMLQEKALKACFSGLTQSEWQRRHTA
QSIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQK
NMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDKNKKKKEPSKQEFTESY
EMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIK
IVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMH
NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEA
LKIYIRKRRPNKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSE
GHEPLTPSSSGNTAEHSPSISPSSVENSGVGQSPLVQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcggatcaattacaggcttttagcggtgttgtctgtcataattcatgattcg
ggtctgggaaaaggaccagcagcccagcgtgccaagaaaggggcagagttggatggagtt
gggtggacttctcccgtgcctcctgcctctccacccctagaggataaagcacttttgcag
acattcagtagagagaggggagagaccatgtttgactgtatggatgttctcgcagtgagc
cctgggcaaatcctggacttctatactgcgagcccgtcttcttgcatgctccaggagaaa
gccctcaaagcatgcttcagtggattgacacaatccgagtggcagcgccggcacactgct
caatctatcgaaacacaaagcaccagttctgaggagctcgtccccagccccccttctcca
ctcccccctcctcgtgtttacaagccctgtttcgtatgccaggacaagtcgtcaggctat
cactatggcgtcagcgcttgtgagggatgtaagggcttcttccgcaggagtattcagaag
aacatgatttacacttgccatcgagataagaactgtgtgattaacaaagtcaccaggaac
cgctgccagtactgccgtctccagaagtgctttgaagtggggatgtccaaagagtctgtc
agaaatgataagaataagaagaagaaagagccttcgaagcaggaattcacagaaagctat
gaaatgacagcagaactggatgacctcactgaaaagatccggaaagctcaccaggaaacc
ttcccatccctctgccagctggggaaatacaccacgaactccagcgccgatcatcgggtg
cgcctggacctcggcctctgggacaagttcagtgagctggccacgaagtgcattatcaaa
atcgtggagtttgctaaaaggctgccgggcttcacgagtttgaccatcgcggatcagatc
accctcttgaaagcagcctgtctggacatcttgattcttagaatctgcacaagatacaca
cctgaacaagacacaatgaccttttccgatggccttaccctaaaccgaacccagatgcac
aatgccggctttggacctctcacagatctggtgttcacctttgccaatcagctcctgcct
ttggagatggatgacacagagacaggccttcttagtgccatctgtttaatctgtggagat
cgtcaggacctagaggaaccaacaaaagtggataagctacaagagccattgctggaagca
ctgaaaatttacatcagaaagagacggcccaacaagcctcacatgtttccaaagatccta
atgaagatcacagatctccgtagcattagtgcaaaaggtgcagaacgtgtgattacactg
aaaatggaaatccctggctcaatgccccctctcattcaggaaatgctggagaattctgaa
ggacatgaacccctgacaccaagttccagtggcaatacggcagagcacagtcctagcatc
tcacccagctccgtggagaacagtggggtcgggcagtccccactggtgcaataa
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