Phascolarctos cinereus (koala): 110201505 Help Entry 110201505         CDS       T05867                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism pcw  Phascolarctos cinereus (koala) Pathway pcw04151   PI3K-Akt signaling pathway pcw04510   Focal adhesion pcw04512   ECM-receptor interaction pcw04974   Protein digestion and absorption pcw05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:pcw00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110201505 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110201505 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110201505 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     110201505 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     110201505 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcw00536]     110201505 (COL2A1) Glycosaminoglycan binding proteins [BR:pcw00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110201505 (COL2A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  110201505 NCBI-ProteinID:  XP_020832875 UniProt:  A0A6P5JF84 LinkDB All DBs Position Unknown AA seq 1490 aa AA seqDB search MFHLGDPRTLLLLATAQVLLIAAVRCQDVDVQNANSCVHKGQRYNDKDVWKPEPCRICVC DTGTVLCDEVICEDTKDCLHPEISFGECCPTCPTDPPTASGHLGPKGQKGEPGDIKDVVG PKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGG NFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGVSG PMGPRGPPGPPGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDG AKGEAGAPGAKGEGGSPGENGSPGPMGPRGLPGERGRNGPPGAAVTRGNDGQPGPAGPPG PVGPSGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGASGNPGADGIPG AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEHGPKGETGPAG PQGPPGPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSG LGGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARG QPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGASGPPGPAGPAGERGEQG APGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQG ARGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEG APGKDGGRGLTGPIGPPGPAGPNGEKGESGPPGPAGTAGARGAPGERGETGPPGPAGFAG PPGADGQPGAKGEQGESGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG FPGAAGRVGPPGSNGNPGPPGPPGASGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKG EPGDDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSSGDRG PPGPVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPAGGPGAPGPPGSPG PAGPTGKQGDRGEAGAQGPMGPAGPAGARGIAGPQGPRGDKGETGEAGERGLKGHRGFTG LQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETG PAGPPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAAGNLRQHDAEVDA TLKSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNM ETGETCVYPNPSSVPKKNWWSSKGKEKKHVWFGETINGGFHFSYGDDNLAPNTANIQMTF LRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYSVLKDG CTKHTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGADQEFGVDISPVCFL NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atgtttcacctgggggatccaaggactctgctgcttctggccactgcccaggtgctgctg atagctgctgtccggtgtcaggacgtggatgtccaaaatgcaaacagctgtgttcacaaa gggcagaggtataatgataaggatgtatggaaacctgagccttgcagaatctgtgtgtgt gacactgggactgtcctgtgcgatgaagtgatctgtgaagacacgaaagactgtctccac cctgagatctcctttggagagtgctgccctacctgcccaactgacccacccaccgccagt gggcatctggggccaaagggacagaaaggggaacctggagatatcaaagatgttgtagga cccaaaggaccccctggaccacagggacctgcaggcgaacaaggaccccgaggtgaccgt ggtgacaaaggggaaaagggtgctcctggacctcgtggtagagatggtgaacctggtacc cctggtaatcctggaccccctggtcctccaggaccccctggccctcctggccttggtgga aatttcgctgctcagatggcaggagggtttgatgagaaagctggaggtgctcagatggga gtgatgcaaggaccaatgggccccatgggaccaagaggaccccctggcccctctggcgca cctggccctcaaggatttcaaggcaatcctggtgaaccaggagaacccggagtctctggc cccatgggtccccgaggtcctcctggtccccctggaaaacctggtgatgatggtgaagct ggaaaaccaggaaaatctggcgaacgtggtcttccaggtcctcagggagctcgtggtttc ccaggtactcctggtcttcctggtgtcaaaggtcatagaggttacccaggcttagatgga gccaagggagaggctggtgctcctggtgctaagggtgaaggtggatctcctggtgaaaat ggttctcctggtcccatgggtccccgaggtctgcctggtgagagaggacggaatggccct cctggtgctgcggtaactcgtggcaatgatggtcaaccaggcccagccggtccccctggc cccgttggtccttctggtggtcctggattcccaggtgctccaggagccaagggagaagct ggtcctactggtgcccgtggtcctgaaggtgctcaaggtcctagaggtgaatctggcact cctgggtctcctgggcctgcaggagcctctggcaaccctggagctgatgggatccctgga gccaaaggatctgcgggtgctcctggaattgctggtgccccaggctttcctggtcctcgt ggtcctcctggtccccaaggtgcaactggccctctaggtcctaaaggtcaaacgggagaa cctggcattgctggcttcaaaggtgaacacggccccaagggagaaactggtcctgctgga ccccagggaccccctggtccagctggtgaagaaggcaagcgaggtgcccgtggagagcct ggtgctgccggacctgtgggtcctcctggagagagaggtgctcctggcaaccgtggtttc ccaggtcaggatggtctggcaggtcccaagggagcccctggtgagcgtggacccagtggt cttggtggtcccaaaggagccaatggtgaccccggccgtcctggagaacctggcctccct ggagctagaggtctaactggtcgccctggtgatgctggacctcaaggcaaagtcggtcct tctggagcccctggtgaagatggtcgccctgggcctccaggacctcagggagctcgtggg cagcctggtgtcatgggattccctggtcctaaaggtgccaatggagaagctggcaaggct ggtgagaagggattacctggtgctcctggactaaggggtcttcctggcaaagatggtgaa acaggtgcctcaggaccccctggaccagcgggtcctgctggtgagaggggtgagcagggt gctcctggaccgtctggcttccagggacttcctggccctcctggccctccaggtgaaggt ggaaaaccaggtgatcagggtgttcctggtgaagctggtgctcctggccttgtgggtccc agaggcgaacgtggtttcccaggtgaacgtggctctcctggtgctcaaggtctacagggt gcccgaggtctccctgggactcctggcactgatggtcctaaaggtgctactggtccagct ggccctaatggtgctcaaggtcccccaggtctgcaaggaatgcctggtgagagaggtgca gctggtattgctgggccaaagggagacagaggtgatgttggtgaaaaaggccccgaggga gctcctggcaaagatggcggcagaggtctgactggtcccattggcccccctggccctgct ggccctaatggcgagaagggtgaatctgggccccctggtcctgctggaactgctggtgcc cgtggtgcccccggtgaacgtggagagactggacctcccggccctgctggatttgcaggt cctcctggtgctgatggtcagcctggtgccaaaggtgaacaaggagaatctggtcagaag ggagatgctggtgcccctggtcctcagggtccatctggagcacctgggcctcagggtcca acgggagtgactggtcctaaaggagctcgtggtgcccagggtcctcctggagccactgga ttcccaggagctgctggccgcgttggacctccaggttccaatggtaatcctggcccccct ggtcctcctggagcttccggaaaagatggtcccaaaggtgctaggggagacagtggtccc ccaggtcgggctggtgatcctgggctccaaggtcctgctggagctcctggcgagaaggga gaaccaggagatgatggtccctcaggtcctgatggtcctccaggtccccagggtctggct ggtcaaagaggaattgttggattgcctggtcaacgtggtgaaagaggcttccctggtctt cctggcccttcaggcgagcctggcaaacagggagctcccggaagttctggagatcgtggc cctcctggtcctgtggggcctcctggcttgactggtccttctggtgaacctggacgtgag ggaagtcctggtgctgatggccctccaggcagagatggtgcagcaggagtcaagggtgat cgtggtgaaacaggtcctgcaggtggtcctggtgcccctggaccccctggctctcccgga ccagctggaccaacaggcaaacaaggagacagaggagaagctggtgcccaaggacccatg ggccccgcaggaccagctggagcaagaggaattgcaggtcctcaaggtccccgtggtgac aaaggagaaactggagaggctggtgagagaggactgaagggacaccgtggtttcactggt ctccaaggtctccctggcccccctggtccttctggagatcaaggtgcttctggtcctgct ggtccttctggtccccgaggtccacctggcccagtgggcccttctggcaaagatggctcc aatggaatccctggccctattggtcctcctggtcctcgaggtcgctctggtgaaactggc cccgctggtcctcctggcaaccccggaccccctggacctccaggtccccctggccctggc atcgacatgtctgcctttgctggcttaggccagagagagaaaggccctgaccccctgcaa tacatgcgagctgacgaagcagccggcaaccttcggcagcatgatgccgaagtggatgcc accctcaagtccctcaacaaccagattgaaagcatccgaagccctgagggctctcgcaag aacccagctcgcacttgccgagacctgaaactctgtcaccctgagtggaagagcggagac tactggattgaccccaaccagggctgcaccttggatgctatgaaagttttctgcaacatg gagactggcgagacctgcgtctaccccaacccatccagtgtccccaagaagaactggtgg agcagcaagggcaaagaaaagaagcatgtctggtttggagaaaccatcaatggtggcttc catttcagctatggagatgacaacctggctcccaatactgccaacatccagatgaccttc ctacgcttattgtccactgagggctcccagaacatcacctaccactgtaagaacagcatt gcctacttggatgaggcagctggtaacctcaagaaggccttgctgatccagggctctaac gacgttgagatccgggctgagggcaacagcagattcacatacagcgtgctgaaggatggc tgcacgaaacacactggtaagtggggcaagacagtcatcgagtaccgatcacagaagacc tcccgtctccctatcattgacattgcaccaatggacattgggggtgctgatcaggaattt ggtgtggacatcagccccgtctgcttcttgtaa

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