Phoenix dactylifera (date palm): 103720419
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Entry
103720419 CDS
T03274
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103720419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103720419
03041 Spliceosome [BR:
pda03041
]
103720419
03032 DNA replication proteins [BR:
pda03032
]
103720419
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103720419
Spliceosome [BR:
pda03041
]
Complex A
U1 snRNP components
Sm proteins
103720419
U2 snRNP components
103720419
Complex B
U1 snRNP components
103720419
U4/U6.U5 tri-snRNP components
103720419
Complex C
U2 snRNP components
103720419
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103720419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103720419
NCBI-ProteinID:
XP_038983806
UniProt:
A0A8B9AAU0
LinkDB
All DBs
Position
7:complement(1384933..1394828)
Genome browser
AA seq
85 aa
AA seq
DB search
MLQTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEFIDGQFSGN
LGEILIRCNNVLYLRGVPEDEEIAE
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagacagttccagttaacccaaaacctttcttgaacaatttgactgggaagcct
gtaattgtgaaattgaagtgggggatggaatacaaaggttatcttgtctcagtagattcc
tatatgaacttgcagctagccaacactgaagaattcattgatgggcaattctcaggaaat
cttggggagatactgataaggtgcaacaatgtgctgtacctccgtggagtaccagaggat
gaagaaattgctgaatga
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