Phoenix dactylifera (date palm): 103721707
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Entry
103721707 CDS
T03274
Name
(RefSeq) terminal nucleotidyltransferase 4B-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103721707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103721707
03016 Transfer RNA biogenesis [BR:
pda03016
]
103721707
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103721707
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
103721707
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
103721707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
PAP_NTPase
DNA_pol_B_palm
TUTase
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
103721707
NCBI-ProteinID:
XP_038981452
UniProt:
A0A8B9A6X6
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Position
4:complement(10706570..10726016)
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AA seq
529 aa
AA seq
DB search
MEKEGMQGSAGFLYETLDTPFFSADPDSAPDNTESYAVYRNQITSPADSFADVPAADYFS
LDVAADNRRREETPPPPPASRASDRNRALEMAWFRAGSRFKSPMFQLHKEILDFCDFVSP
TPEEQASRSAAVQRVFEVVKNIWPHCEVEVFGSFRTGLYLPTSDIDVVILESKVKTSQMG
LYALARALSQRSIAKKMQVIAKARVPIVKFVEKLSGISFDISFDVDSGPKASDFIKDAVK
KMPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAYLQVHWRGQDIQGCRRSMEH
NLGVLLVNFFDFYGRKLNTWDVGVSCNSVGTFFLKSDKGFMNAERPYLLSIEDPQAPDND
IGRNSYNYFKVRSAFAMAYSLLTDTKAIIGLGLNRSILGTIIRPDPVLLERKGGDNGELA
FNNLLPGAGEPVTQQFENGSDVIYNWQLVDDEPLPRGRVLADDDCILSSRRRASKAKQRS
SKSQKLEVWGGMNEENGVRSARGLRKQWKGSRDGDESTSSFHHHSRRSH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagggatgcaagggagcgcgggtttcctctacgaaaccctcgacaccccc
ttcttctctgccgaccctgactccgcccccgataacaccgagtcctatgccgtctaccgc
aaccagataacctctccagcggactccttcgccgacgttcccgccgccgactacttctcc
ctcgacgtcgccgccgacaaccgccgccgggaagagaccccgccgccgccccccgcttcc
cgcgcctcggacaggaaccgggccttggagatggcctggttccgcgctgggagccgtttc
aagagccccatgtttcagcttcacaaagagatactcgatttttgtgattttgtctcgcca
actcctgaagaacaagcctcacgttctgctgctgtgcagcgtgtttttgaggttgtcaaa
aacatctggccgcactgcgaagtggaagtttttggatcatttaggacgggcctctatcta
ccaacaagtgatattgatgttgtgattttggagtcaaaggtgaagacttcacaaatgggt
ctttatgctcttgctagagcactatcgcagagaagtattgcaaaaaaaatgcaggttata
gctaaggctcgcgtgccaattgttaagtttgtggaaaagctaagtgggatatcttttgac
atcagttttgatgtggacagtggacctaaagcttctgattttatcaaggatgctgtgaaa
aagatgcctcctttacggcccttgtgcttgattctgaaggtttttctgcagcaaagagaa
ctgaatgaggtatattcaggtggtattggttcttatgcccttcttgcaatgttgatagca
tacttacaggtgcattggagaggacaagatatacagggttgccgccgatctatggaacat
aacttgggagttcttttggtgaacttctttgatttttatggtcgcaaattgaacacttgg
gatgttggtgtttcttgcaattcagtaggcacttttttcttgaagagtgataaaggattt
atgaatgctgaacgaccatatcttctatccatcgaggatccacaggctccagacaatgac
attgggaggaattcttataactattttaaggtgaggtcagcctttgcaatggcttactct
ttactgacagatacaaaagccatcataggcttgggcctgaacaggagcattctagggacc
ataattagaccagacccagtgcttctagagcggaagggtggagataatggagaacttgct
ttcaataacttgcttccaggggcaggtgaaccagtgacccagcagtttgagaatgggagt
gatgtaatatataactggcaattggtggatgatgaaccactgccaagggggagagtactt
gctgatgatgattgtatattgtcttctaggaggagggcctcaaaagcaaaacaaagatcc
agtaaaagtcaaaagctggaagtttgggggggtatgaatgaagaaaatggtgttaggagc
gcaagaggtttgagaaagcagtggaaaggatctcgagatggggatgaatctactagtagc
ttccatcatcactcaaggcgaagtcactga
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