KEGG   Phoenix dactylifera (date palm): 103723294
Entry
103723294         CDS       T03274                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103723294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    103723294
Enzymes [BR:pda01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103723294
Transcription machinery [BR:pda03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103723294
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 103723294
NCBI-ProteinID: XP_038976857
UniProt: A0A8B8ZU18
LinkDB
Position
Unknown
AA seq 1698 aa
MEENIPSPLISDGSVRGISFSAATIEEIRTYAINDCPVSHPSQLTNPFLGLPLEFGKCES
CGTAEPGKCEGHFGYIELPVPVYHPSHVSELRQILSLVCLKCMRMKGKVKHGSGKEKVST
TSCLYCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWNFLNRFGFCYGDTYCRPLL
PYEALNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEISDGKNIMSSDISI
SLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQLSISQYMRLRGTPKVPQDITKKFAIG
TEANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVT
VHNMKQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINRPP
STHKHSLQAFYVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELFSVE
KQLLSSHTGNLNLQLVHDTLLALKLMFNTAFLRKATAEQLAMFVSPILPPPAIFKANKSG
PFWTVHQILQNALPAFVDCFGERHLIIDSEIIKLDFRRDAVQSLFTEIITSIFIKKSPKE
ALNFFNMLQPFLMEVLVMEGFSISLKDFYVPREVLEKAQQSVQENSFILHQLRSKYNELV
ELQVENHLKSIKLPIVNFILNFTSLGNLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLYSR
ALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHSISSREVIVRSSRGL
TEPGTLFKNLMAILRDVIICYDGSVRNVCSNSVIQFEYGEDDGANSLNVSPAGEPVGVLA
ATAISNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCFCGKKFCK
ENAAITVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRS
PDEILRKCQDVIFGYGKKKGKLSHFFRRIILLVSECCSTRQPDVGNLSPFPCLQFSYCDQ
TATPDCESLERGIHVMANTICPILLDTIIKGDPRVREANIVWTGPYATSWVRNSCKTLKG
EVAVEVVVEKDAVRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQA
VQRLSASITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKALFRSLKVQVPFTEATLI
TPMKCFERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILWNKRQMAENQNIGKGFYD
FLELVRTSSQGEAGNGCSVDVDDLGVNENDEVCLSPEIGFEKLTFDDGFEVDYNLKKDIS
MENGKVGNSSWEKLSDSVVGSDRWQGWENGNQPEMDTSSGWQGWDNGKQPFIDRSDRSQG
WGNERVTDRENSKLPTARPSVWSSWDASDVQERSQASSPKSQPRHVASSSKSRIWSSQSS
SKVADGSSVDTTSKGNAQDGWNHVTESPAKPVWDTNITRKSHEADNTWNTSAFSKSNVWD
GQSFDKVHNEGSDGGRWNENQATDRKNQSWKSHGWNSSNATDRRTQRNYSNKSLGMPDNR
KGWNPNSLLTSTGRRLDSFTVEEERILVEIEPTMQTIRRILRESSDGDQLSADDQKFILE
RVFQHHPDKQAKVADQIDHIMVDKHQSFQDSRCFYVVSCDGTSADFSYIKCMENFVKEIF
PEHAESFNRKYFRRRLPK
NT seq 5097 nt   +upstreamnt  +downstreamnt
atggaggaaaatataccatctcctcttatttcggatggctctgttcgtggtatcagtttt
agtgctgcaacgatcgaggaaattcgtacatacgccataaatgactgcccagtttctcat
ccaagccaactaacaaatcctttccttggtttgccattagaatttggcaaatgtgaatct
tgtggcactgctgaacccggaaaatgtgaaggtcattttggttacatcgagttgccagta
cctgtatatcatccttctcatgtcagcgaattgagacagatcttgagtttagtgtgtttg
aagtgcatgaggatgaaaggaaaggtcaaacatggcagtggaaaagaaaaagtctcaacg
acatcatgtctgtattgtcgggatcttccacccatatccgttaaagaagtaaagacaaca
gataatgctctttgcttagaattgagagtatcatcgaggacaaggctgcgagatggcttc
tggaactttttgaatcggtttggtttttgttatggtgacacctattgtcgcccattgctt
ccatatgaggctcttaatattttgaaagagattcctgaagaaaccaaaaaaaggcttgct
gcgaagggatattttcctcagattggttttattttgcaatatcttcctgttccgcccaat
tgcttatgtgtgccagaaatttcagatgggaaaaatatcatgtcctctgatatttctatc
tccctgcttaaaagagttcttaacaagattgagctcatcaaaaggtcaaggtctggtttc
ccaaattttaagtcccatgaagttgagtccaatgacctgcagttatctatttctcaatat
atgcgtctcaggggcactccaaaggtacctcaagacatcaccaaaaagtttgcaatcggc
actgaagcaaatgaatgttccacaaaactgtggcttgaaaagatgaggacattgtttatc
agaaagggctcaggtttctcttcccgcagtgtaatcactggagatgcatatataggtgtt
aatgtaattggtcttccatctgaaatagcaaagagaattacctttgaagaacgggtaaca
gtgcataacatgaaacagttgcaggaagtcgttgataaaggattgtgtgtgacatacaaa
gatggtttctccacttatgcaattgccgtgggctcaaaagggcatacttatcttaaagtt
ggccaggttataaatcgtcggattatggatggtgatattgttttcattaacaggccacct
agtacgcacaaacactcgttacaagcattttatgtatatgtccatgatgatcacactgtc
aagatcaaccccctcatttgtgctccccttggagcagattttgatggtgattgtgttcat
atattttatccacagtccctagctgcaaaggcagaagtcctagaattgtttagtgttgaa
aagcagttacttagttctcatactggaaacttaaacttgcaactggttcatgacacattg
ttggctttgaaactcatgttcaacacagcattcttgagaaaggcaacggcagaacagttg
gcaatgtttgtatctccgatcttgccaccacctgccatatttaaagctaataaatctggc
cctttctggactgttcatcaaatactgcagaatgctctgccagcttttgtggactgtttt
ggagaaagacatctcattattgatagcgaaatcatcaagctagactttagaagggatgca
gtgcagtcattgtttacggagataattacttctattttcatcaagaaaagtccaaaggag
gctttaaacttctttaatatgttacagcctttcttgatggaggtactagttatggaagga
tttagtatcagtttgaaagatttttatgttccaagggaagttctagaaaaggcacaacaa
agtgttcaagaaaattcatttatacttcatcaattgagatcaaaatacaatgaacttgtg
gagctgcaagtcgagaaccaccttaaaagcatcaaactaccaattgtgaatttcattttg
aacttcacttcactgggtaatttgattgattcaaaaagtgattcgtctattatcaaagtt
gttcaacaacttggatttttgggtcttcaactttttgaccgagggaagttatactcaagg
gctttggtcgaggattgttttacgaactttgtaaacaaatattccaccagtggagctgat
cattcctgtgaggcatatggactagttaagaattgtttctttcatggcttaaatccgtat
gaagagttggtccattctatttcatccagagaagttatagttcgttcatcgagaggactg
acagaacctggaactttgtttaagaacttaatggcaattcttcgggatgttattatctgc
tatgatggaagtgttagaaatgtctgcagtaattcagttattcagtttgagtatggagag
gatgatggggctaattccttgaatgtttcacctgctggtgaacctgttggtgtcttagct
gccactgcaatatcaaatcctgcatataaggcagtcctagaatcctcgcaaagtaacaat
tcatcttgggaattgatgaaggagatattgctttgtaaagtcacttttaagaatgttgtt
actgatcggcgtgtgattttatatttaaatgattgcttctgtgggaaaaagttttgcaaa
gaaaatgcagcaattactgttcaaaattgcttgaagagagttactttgaaggattgtgca
tgtgacttctcaattgaatatcaaaaggaaattagcttacgtgatagttcagaaactact
tcaggccttgttggtcatattcatcttgacaagatgcggttgaaattgctaaaccgaagt
cctgatgagattcttcggaagtgtcaagatgttatttttggctatggaaagaagaaagga
aagctctctcacttttttaggagaattattttattagtcagtgaatgttgcagcaccagg
cagccagatgtcgggaatttgtctccattcccatgcttgcagttctcttactgtgatcag
actgccactccagattgtgaatctcttgagcgaggaatacatgttatggcaaacactata
tgtccaattttattggatacaattattaaaggtgatcctcgagtccgtgaggctaatatt
gtttggactggaccatatgcaacctcttgggtgagaaattcatgcaaaacattgaagggt
gaggtagccgtcgaagttgttgttgaaaaagatgcagttcgacgacatggtgatgcctgg
aggactgttatagatgcttgcttacctgtaatgcacctcatcaacaccaggcgatctatt
ccttatggcattcaacaacttcaagaacttcttggcatttcttgtgcttttgatcaagca
gttcagcggttgtcagcatcaattacgatggttgcaaagggagtgctcaaagatcacctt
attcttgttgcaaatagcatgtcatgcactggaaaccttattggtttcaatactgctggc
tacaaggcactttttcgttctttaaaagttcaagtgccgtttactgaggccacattaatt
acaccgatgaaatgttttgagagagctgctgagaagtgccacactgattcattaaccagt
gtggtctcgtcatgtttatggggtaaacatgtagcaatcggcactggttcgcctttccag
attctttggaataaacggcagatggcagaaaatcaaaatattggaaaaggtttttatgat
tttcttgagttggtaaggacatccagtcaaggcgaagcaggtaatggatgttcagtggat
gttgatgatctaggggttaatgaaaatgatgaggtttgtttatctcctgaaattgggttt
gagaagctgacatttgatgatggatttgaagttgattacaatcttaaaaaagatataagc
atggaaaacggaaaagttggtaactcaagctgggaaaagctttcagattcagtggttggc
tcagatagatggcaaggatgggaaaatggaaaccaacctgagatggacacgtccagtggc
tggcaaggatgggacaatggaaaacagccttttatagatcgatccgataggtcacaagga
tggggaaacgaaagggtaactgatagagagaactccaaactgccaacagccagaccaagt
gtttggtctagttgggatgctagtgatgttcaagaaaggtcccaagcttcgagccctaaa
agtcagcctcggcatgttgcttcatcttcaaagtcaagaatttggagcagtcagagttcc
agtaaagttgctgatgggagcagtgtggataccacatctaaaggtaatgcccaagatgga
tggaaccatgtgacagaatcaccggcgaagcccgtctgggatactaacataacaaggaaa
tcgcacgaggcagacaacacctggaatacaagtgcattttccaaatcaaatgtctgggat
ggtcagagttttgacaaagttcataatgaaggttcggatggaggcagatggaatgagaac
caagcaactgatcgtaaaaatcaatcatggaaatctcatggttggaattcttcaaatgca
actgatcggagaacccagcgaaactattctaacaagtcattagggatgccagataatcga
aaaggttggaatccaaattcattgttgacctcgacaggacgccgattggattcttttaca
gttgaggaggagaggattcttgttgaaattgaaccgactatgcaaacaataagaaggatt
ttgcgtgaatccagcgatggtgatcaactatctgctgatgatcaaaaattcattctggag
agagtttttcagcaccatcctgataagcaagcaaaagtggctgatcagattgaccatatc
atggttgacaagcaccagagttttcaagattccaggtgtttttatgtggtctcttgtgat
ggcactagtgctgatttctcctatataaagtgcatggagaattttgtgaaggaaatcttc
ccagagcatgcagagtccttcaacagaaagtacttcaggaggcgccttccgaaatga

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