Pocillopora damicornis (lace coral): 113671471
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Entry
113671471 CDS
T05773
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113671471
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113671471
Spliceosome [BR:
pdam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113671471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113671471
NCBI-ProteinID:
XP_027043481
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MSRFDRGRSFDPGSRSERKSFGGGGGGSRGSGRGGFGGGSFRGGGGGGGFGGKKDKLNNS
PGQHLRKPKWDLDALPKFKKDFYREHPNVQNRSMQEVEEYRRRSQLTVQGRNVPKPVVTF
EEASYPNNIMDTIRSEGFQEPTVIQAQGWPVALSGRDLVGIAQTGSGKTISFILPAIVHI
KHQPLVQRGEGPVALVLCPTRELAQQVQTVAFQYGRNTNVKSVCIYGGAPKGPQIRELEK
GVEICIATPGRLIDMLEAGKTNLRRCTFLVLDEADRMLDMGFEPQIRTIVEQTRPDRQTL
MWSATWPKEVQGLAADFLRDCVNITVGSVGLTANHKILQIVDVCDETEKDYKLIKLLEEI
MGESENKSLIFTETKRRADELTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRKGNAPILV
ATDVASRGLDISDIKFVINFDFPSCSEDYVHRIGRTARSDRTGTSYTFFTVGNAKQAKDL
ISILKEANQHVNPKLIALAEQAKGMFGKGRSRFRDKSALGNSGHFNRNNYGDSRSDSRSS
TGSRSGGHSSYSGGGRGSSGRGGSHMSSANKSFNSNRSQDSRGVRSHSQQNGSWNHMGTQ
QHNMMGGGGGGGYNNYSNSYAHQAPPPPPPGPPPSHSNPPQPLMQQQQYNQTTTYSQPSY
QAYQQQATNAGQGQVQQTAGWS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttgatagaggtcgctcctttgatccagggagccgttcagagcgtaaaagc
tttggaggtggtgggggtggtagtagaggaagtggccgaggtggttttggtggaggatca
ttcagaggggggggtggtggtggaggatttggtggcaaaaaagacaagttaaacaacagc
ccaggacagcatcttaggaaaccaaagtgggatctagatgccctgcccaaatttaagaag
gatttctaccgagaacatccaaatgtgcaaaacagatccatgcaagaagttgaggaatac
aggagacgttctcagcttactgttcaagggaggaatgtccctaagccagtagtaacattt
gaagaagctagttatccaaataatatcatggatacaataagaagtgaaggattccaagaa
ccaacagtaatacaagcccagggttggccagttgcactaagtggaagggaccttgttgga
attgcacaaactggatcaggaaaaactatctctttcattttaccagcaatagttcatatc
aagcaccaacctcttgtccagcgtggagaaggtccagtggctcttgtcctttgtcctaca
agagaattggcacagcaggtgcaaactgtggccttccagtatggtcgcaataccaatgtc
aaaagtgtgtgcatctatggaggggcacccaagggaccccaaattcgtgagcttgaaaaa
ggggtggagatatgtattgccacaccaggaagattgattgatatgttggaagctggtaaa
acaaacttgcgacgctgcacatttttggtacttgatgaagcagacaggatgcttgacatg
ggctttgaaccacagatcaggacaattgttgaacaaacaagaccagacagacagacactc
atgtggagtgctacatggcccaaggaagtgcaagggctggcagctgatttcttgcgggac
tgtgttaacatcacagttggctcagtggggctcactgctaaccacaaaatcttacagatt
gtggatgtttgtgatgaaactgaaaaagactacaagttgatcaagcttttggaagagata
atgggagagtctgaaaacaagtcactcatttttactgagacaaagagaagagcagatgaa
ctaacaagaaggatgcgtagagatggatggccagcaatgtgcattcatggggacaaatca
cagcctgaaagagattgggtattaaatgagttcaggaaaggtaatgctcctattctggtt
gctactgatgttgcctccagaggactagatatttccgacatcaaatttgtcatcaatttt
gacttcccaagttgctcagaagattatgtgcatcgcattggaaggacagcaaggtctgat
cgcactgggacctcgtacactttcttcactgttggaaatgccaagcaggctaaagattta
atttccattttgaaggaagcaaaccaacatgttaacccaaagctaattgcacttgcagaa
caagcaaagggaatgtttggtaaagggcgaagccgttttcgtgacaaatctgcactgggg
aatagtggtcactttaacaggaacaactatggggattcccgcagtgattcaaggagtagt
actggaagcagatcagggggacattcaagctattcaggcggaggtcggggttcctctggc
agaggtggcagtcacatgtccagtgccaacaagtcattcaattccaaccgaagtcaagac
tctcgtggggtaaggagtcactcacaacagaatggctcatggaaccatatgggaacacaa
cagcacaatatgatgggaggaggaggaggaggaggctacaataattacagcaattcatat
gcacaccaggcacctcctccacctccaccaggtcctcctccttcccactcaaatccaccc
cagcctctcatgcaacagcagcagtacaaccaaactactacatactctcagccatcctac
caagcttaccagcaacaagctacaaatgctgggcagggacaagtacagcagactgcaggg
tggtcttaa
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