Pocillopora damicornis (lace coral): 113682411
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Entry
113682411 CDS
T05773
Name
(RefSeq) E3 ubiquitin-protein ligase rnf213-alpha-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113682411
Enzymes [BR:
pdam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113682411
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113682411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_5
AAA
ABC_tran
AAA_7
AAA_22
AAA_14
MCM
Motif
Other DBs
NCBI-GeneID:
113682411
NCBI-ProteinID:
XP_027055382
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MRICEPVWNAVDADPKLPEKLLESSRQIEWIKSVRKSHGSVAMSSLMEAEKINAQGVYCV
GCQDRDASALPAMEQLTPDKVIQLQMPAEDNVDRKIYSLNDLKDLQSKLMLIAAKASQGK
EEVDRFLDILQCVHRLASVYISLCKAGEVSHLKWQRKFDCSPKLSNSCSLTNDLMDESKL
MEQSLRDWKQELHAKRLLYGELNHFTTSQLLFLRNKLAEVKGRGPKAVDGIPLEVYNLLE
SVLPGIDPSILKSTLLFCGIFAQESGQQMLRSYGASSISRYRDKEMERPPMVKTVPSSNQ
EMFQSLVVKLESLGYSEEVALAAMVTCKDASEADLIVWCVKNGAKKDLIATKYSEALSDP
SYLRLIERESTTFSKLESQQEKEMTSEAEDFSEPMEASNTLDQTAGGTFLSLDELGKLLL
HLASQGSKRERRCIPRYLKRGKPNFVVVPKDDVLGTLLSLYMHDSSQSLPTTEEVLICSS
DTSAEEIELLWRRSLADHNGRLFCLVNVDLLDYGVSQQASDVLEVLLHEPQYSRNEGLSL
IVICSSENENRAHMAAALDQYRLGTIPHCCSSREIRQYLKLQLKPRSQQRATFRDQVLPW
IPAAALDREELAVRVISSERAGSGKSLAVCRLSQRLSELQNNDAVMDYLKDMSTDVPLCI
SVPIYGPIVHQRVVVESLLPHIIVPDLPLSRIFHFDVHPSVRGGLDTLLFNLLILGALKN
SSGQIWRRRSSDLYVIEITSGVSPNVCETVERRQTSPKVSKKDTAEPFYRLLPTIQCGTP
MQTLHQLRTNLAADSSLNPLFDNAEFKSSYVQRAFQYLKLYEAGGQTLDHFWFVPGQVMG
DHTECIDILTRHCGIENPSWAEVRHFVNFLDSQLQACEESSFCNMELVGDTLEGFRSFVV
RFMILMSRDFATPSLKTCEETTQTPGLDDDTVVEDMEPAAVEVSQFSLRRHWETSSHPYI
FFNQDRITMTFVGFHIDPNGNLIDPYRQVTIQPNLMSRHLRTGLHVQRVDMQTNYESWSK
GQKIEKLCGVMGVEWPCDPDDSYELTTDNLKKILAIHMRFRCGIPVVIMGETGCGKTCLI
RYMCGLQSGPGGPKNMLLMKVHGGTTYKDIEKKVEEAEAMAIVNETLNIDTVLFFDEANT
TDALGMIKEVMVDRRVNGRKIGLGLKRLQFIAACNPYRKHTNEMIHKLESAGLGYHVTTQ
QTQDRLGHIPLRHLVYRVHALPESMRPLVWDFGQLKPEIEELYIRQIVTRFVLQEEKIPG
DASLVKALTTILTASQRYMRDQTDECSFVSLRDVERAMNVMVWFYNHRNALNPLMDDDTD
EDSDDDDDDSDVEYDEDELDQPLDDVTRAVVLSLGVCYHARLQDRKPYRQAVAQSFANPC
QLPGGQERILKEITSCQKAVLNELELGDNIARNTALSENVFMMVVCIELRIPLFVVGKPG
SSKSLAKTVVTDNMLGDASRSDLFKTFKQVQMISYQCSPLSTAEGIMATFRNCSNLQKAN
NPDKYVSVVVLDEVGLAEDSPLMPLKTLHPLLEDGVNLTDDIIANEEQLLERVAFIGISN
WALDPAKMNRGIMLSRGLPDSEELVESAMGICSTNKRIQSFVAPLMNPLALGYKKLYDNQ
RESETLQESKKDEFFGLRDFYSLVKMVYKIAEEQGREPRWPEVEHAIRRNFGGLDEIEPV
EIFKQFAFGGSRMMEQNEDPLSAVNLIKASLKDQKKTKGESRYLLVLTENYAALPIVLKE
LLRTGDETRPGDEPVVIFGSSFPKDQEYTQVCRDINRIKVCMETGRTVILLNLESLYESL
YDALNQYYVYCGDQKFVDLGLGSHRVKCRVHNDFRLVVIAEKDVVYSKFPIPLINRLEKH
YLVTSASLSPAQKVVVDQLNDWVNGFSHVNIPRHQQMRKYLPGDAFVGYHDDTAASVVLQ
VCSDLDEDELYSRFNDKNFSERVLKESQELLLQCATPDAVARLVHTKLATQADQLWEIYF
TGQEHSSLTAFLRNVLTTEEKKLGQPEGTLIQVTTHARLLSSNDLKDISSATSL
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttgtgagccagtgtggaatgcagtggatgctgaccctaagctccctgaaaaa
ctgctagaaagtagccgtcagattgagtggattaaaagtgtcagaaagtctcatgggtct
gtggctatgtcttccttaatggaagctgagaagataaatgcacagggcgtatactgcgta
ggatgtcaagatagagatgcctcagcattaccagcaatggaacaactgacacctgacaaa
gtgattcaacttcagatgcctgctgaagacaacgttgaccgcaagatttacagtctgaac
gatctaaaggatttgcagagcaaactgatgcttattgcagcgaaggcgtctcaagggaaa
gaagaagtagacagatttttggatattctacaatgtgttcatcgtcttgcctcagtatac
atttctctttgcaaagctggagaagtaagtcatctcaagtggcaacgtaaatttgattgt
tcgccaaaactttctaatagctgctctcttacaaatgatctgatggatgagagtaaactc
atggaacagagtcttcgagactggaaacaagaattgcatgccaagcgattgctttatgga
gaattaaatcacttcaccacgagccagttgctctttcttcgaaacaaattggcagaagta
aagggaagaggtcccaaagctgttgatggaattcctcttgaggtgtataaccttctggag
agtgtgttacctggcatcgacccttccattttaaagtctacccttttattttgtggcatt
tttgctcaagaaagtggacaacagatgctcagatcgtatggtgcaagcagcataagtcgc
tatcgtgataaagaaatggaaagaccccctatggtgaagacagttccttcttcaaaccaa
gaaatgttccagtcacttgtggttaagctagagtcgcttggttattctgaagaagttgcc
ttggccgcgatggtcacatgcaaagatgccagtgaggcagatctcatcgtttggtgtgtg
aaaaacggtgcaaaaaaagatctcatcgcgactaagtactctgaggccttgagtgatcca
agttatttgcgacttatagaaagagaaagcactacattctctaagctcgaaagccaacaa
gaaaaggaaatgacgtcggaagcagaagatttttcagaacccatggaagctagtaacact
cttgatcaaacagcaggaggaacgtttttgagtcttgatgaattggggaagcttttgctt
catctagcatcccaaggatcaaaaagggaaaggaggtgtattccaagatacctaaaacgt
ggaaagccaaattttgttgtcgttccgaaagatgatgttttgggaactttactgtcttta
tacatgcatgacagttcgcagtctctaccaacaacagaggaagttttgatctgctcttcc
gatacaagcgcagaagagattgaactactgtggcgtagatcccttgcagaccacaatggc
aggttgttttgtttggtaaatgttgaccttcttgactacggtgtttctcaacaagcttct
gacgttctagaagttctattgcatgagcctcaatacagtcgaaatgaaggcctgtctctt
atagttatctgtagctccgaaaatgaaaacagagctcacatggctgcagctctagatcag
tataggcttggaactattcctcactgttgctcatcaagagagatcaggcagtacctgaaa
ttacagcttaagccacgctctcaacaacgggcaactttcagagatcaagtcttgccttgg
attcctgcagctgcattggacagagaagaacttgctgttagagttatttcatctgaaaga
gctggatctgggaaaagtttggcagtctgtcgactcagtcagcgccttagtgaacttcaa
aacaatgatgcagtgatggattacctcaaggacatgagtacagatgtgccactttgcatc
agtgtaccgatctatggaccaatcgttcaccaacgtgttgtggtcgagtctttattgcct
cacattattgttccagatttgcccctttcccgcattttccattttgatgtacatccttcg
gtaagaggtggtctggacacgcttctcttcaacctcttaatccttggtgccttgaagaat
agtagtggtcagatctggaggcggcgatcctcagatctttatgtcattgaaattacttca
ggcgtatctccgaatgtatgcgaaacagtggagagacgacaaacgtctcctaaggtctcc
aagaaagacacggcggagcccttttacaggcttcttcctacgatccagtgtggaacaccg
atgcaaacattacatcaactgagaactaatctagcagctgacagcagtttgaaccctttg
tttgacaacgctgaattcaaaagctcctatgttcagcgggcctttcagtaccttaagctg
tatgaagcgggcggtcagactcttgatcatttttggtttgtacccggtcaagttatgggc
gaccatacagagtgtattgatatactcaccagacattgtggtatcgagaacccttcatgg
gccgaggtacggcactttgtgaattttctcgactcccaactacaagcctgcgaagaaagt
tcgttctgcaacatggaattggtgggggacactcttgagggttttagaagttttgtggtt
cgttttatgatcttaatgtcacgggattttgccacaccatctctgaaaacatgtgaagaa
accactcaaactccaggccttgatgacgatactgttgttgaagatatggaacctgcagca
gttgaagtctcacagtttagtctaaggagacactgggagactagttcgcatccctacata
ttcttcaaccaagatcgtattacaatgacgtttgttggctttcacattgacccaaatggg
aacttaatcgatccgtaccgtcaagttaccattcagccaaacttgatgtccaggcacttg
cgtaccggccttcacgttcaaagggttgacatgcaaactaactatgaatcttggagcaag
ggacagaaaatcgaaaaactttgcggagtaatgggtgtcgaatggccttgtgatccagat
gactcgtacgagctcaccacagacaacttgaagaaaatcttagctattcacatgcgtttt
aggtgtggcatccctgtggtcatcatgggtgagactggctgtggtaaaacatgccttatt
cgatacatgtgtggcttacagtctgggcctggtggacctaaaaacatgcttctaatgaag
gttcatggaggtactacctacaaagacatagagaagaaagtggaggaggctgaggcaatg
gctattgtgaacgaaacgttgaatatcgatacggtgttattctttgacgaagctaacaca
actgatgctttgggaatgatcaaagaggttatggtcgatcgccgagtcaatggcagaaag
ataggattagggcttaaaagattacagttcatagcagcgtgcaatccttacagaaaacat
acaaatgaaatgattcataagttggagtcagctggcctggggtaccatgtcaccacgcaa
cagacacaggatcgccttggtcacattcctcttcggcatctggtgtacagagtgcatgca
ctaccagaaagcatgcgtccgttggtatgggactttggtcagcttaagcctgaaattgag
gagctttacattcgtcaaatcgtcaccagatttgttttacaagaagagaaaattccagga
gatgcctcgctcgtgaaagccttgacaaccatacttactgcttctcagcgctacatgagg
gaccaaacggatgagtgcagctttgtgagtcttcgtgatgttgaacgtgcaatgaatgtg
atggtttggttttacaatcaccgtaatgctctcaatccattaatggatgatgacaccgat
gaagacagtgatgacgacgatgacgacagcgatgtcgagtatgacgaggatgaattggat
cagccccttgatgatgttactcgagcagttgtgctctcccttggggtttgttatcacgca
cgccttcaggacagaaagccatatcgtcaagccgtcgctcaaagctttgcaaacccctgt
caattgcccggcggacaagaacgtattctgaaggaaatcacaagctgtcagaaggcagtg
ttgaatgaactggaacttggggataacattgctcgcaatacagcattgagcgaaaatgtg
ttcatgatggtggtatgtattgaactgaggattccactgtttgtcgtcggtaaaccgggt
agctccaagtcacttgccaagactgttgtaactgacaacatgcttggagatgcctcaagg
tctgatctcttcaagacgttcaagcaggtccagatgatttcttatcagtgcagtccgctc
tcaactgctgaagggatcatggcaacctttcgcaattgcagtaacttacagaaagccaac
aacccagacaagtatgtatcagttgtggtcttggacgaggttggccttgctgaagactca
cctttgatgcccctgaaaactcttcatccgctacttgaagatggggtgaacttaaccgat
gacatcattgccaatgaagagcaacttctagaaagagtggcgttcattgggatctctaac
tgggctctagaccccgcaaaaatgaaccgtggaattatgttatcacgtggtctgcctgat
tctgaagaacttgtggaaagtgcaatgggcatttgttccaccaataaacgcatacaaagc
tttgttgcaccactaatgaatcccctggcactcggttacaaaaaattgtacgataatcaa
agagagtctgagaccctccaggagtccaaaaaagatgaattttttggccttcgggatttt
tacagccttgtgaaaatggtgtacaaaattgctgaggagcaaggtcgcgagccacgttgg
cctgaggtagaacatgccataagaagaaactttgggggactggatgagattgaacctgtg
gaaattttcaaacaatttgctttcggtggaagccgcatgatggagcaaaatgaagatccg
ttgtctgctgtgaatctgatcaaggccagccttaaagatcaaaagaaaacgaaaggagag
agtcgatacctactggtattgacagagaattatgccgctctgccgattgttttgaaagag
ttacttcgaaccggtgatgaaactcgacctggtgacgaacctgtcgtaatttttgggagc
agctttccgaaagatcaggagtacacacaggtttgccgagacattaatcgaattaaggta
tgcatggagacaggacggactgtaatccttctgaatttagagagcctctacgagagtctc
tacgatgctttgaatcagtactatgtgtattgtggagatcagaaatttgttgaccttgga
ctaggaagtcaccgcgtcaagtgccgtgtacacaatgatttcagactcgttgtgattgcc
gaaaaagacgtcgtttacagcaagtttccaatacccctcatcaatcgcctggagaaacat
tatcttgtgacgtcagccagtctcagtcctgcacaaaaagtcgttgtagatcaactcaat
gattgggtcaacggattttcccacgtcaacattccgcgacatcaacagatgaggaaatat
ttgcctggtgatgcatttgtcggttaccacgacgatactgcggcatcagtagtgctacaa
gtgtgcagtgacttagacgaggatgaactgtacagtcgtttcaacgacaagaatttttcg
gaaagggtcctgaaggaatcccaggaattgctgttgcagtgcgccacacctgatgctgtg
gcaaggttggttcatacaaagcttgctacacaggcagatcaactatgggagatttacttt
acaggccaggaacattcaagtttaacagctttccttcgaaatgtgttaacgacagaagaa
aagaaattgggccagcccgagggaactttgattcaggtgacgactcatgctaggttgctg
tcgtcgaatgatttgaaagatatttcatctgctacctctttg
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integrated database retrieval system
