Clostridioides difficile 630: CDIF630_03137
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Entry
CDIF630_03137 CDS
T03885
Name
(GenBank) transcriptional regulator, sigma-54-dependent
Organism
pdc
Clostridioides difficile 630
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
PAS
HTH_8
PAS_9
AAA_5
AAA_2
PAS_8
Mg_chelatase
AAA
AAA_19
PAS_10
HTH_7
TrkA_N
AAA_7
AAA_22
PAS_4
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AJP12618
UniProt:
Q183V3
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Position
3339996..3341888
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AA seq
630 aa
AA seq
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MKEILVIAPTKGTYEKSIHIVKKNKYKTIDVVFGNLKEGIPLAEKSINHGTRIIISRGGT
YNMLKATYNIPIVEIKVDAYDIIKSYKEVKNSNEPFGIIGFNNVIYGFDIIEEILNKKIT
MIEIEKEEEIYDAIEKYRKKGINTYIGDTTVAHIVKRLNCKGILIESREENILRAIQQAE
QILEATKDEQKRRLQIEAMTDFVHDGIITVDKNFKITLFNKSAEKIFGIKKENALYHNVV
DVIPNTVLPQVVETMEPQIGEIQNIGSTKIITNRVPIIVDGQIQGAVSTFQDSKEISSFE
HTIRRSLLSKGLSAKYTFDDIIHASKKTKDCIELAKKYACYDTPMIITGESGVGKELFCQ
SIHNYSKRKNAPFVAVNCAAIPPSLIESEFFGYEEGSFTGARKKGKAGVFELAHEGTIFL
DEISEIPLELQGRLLRVLQEKQVMRIGGDKVIPIDVKIICASNKDLKNMMRNGLFRQDLY
FRINILTLYLPSLKERKEDIIKLSEFFIHKYSSKYNKTPLIITPNIKKALLEREYEGNIR
ELEGMMERAVIVESFDSILLEKLSNEYTNNIVDKDNSDFECSNLDLKTLEKKYIYKIYNE
NNRNTTKTCEILKITRSTLWRKLKEIEDDV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatacttgttattgctcccactaaaggaacctatgaaaaatcaattcacata
gttaaaaaaaacaaatataaaactattgatgttgtatttggcaatctaaaagaaggtata
cctcttgctgaaaaaagtattaatcatggtactagaattatcataagccgaggtggaact
tacaatatgttaaaagctacttacaatatacctatagttgaaattaaggtagatgcttat
gatattataaaaagctacaaagaggtaaaaaattccaatgaaccatttggaataattgga
tttaataatgtcatctacggtttcgatattatagaagaaatattgaataagaaaataact
atgattgaaattgaaaaagaagaagaaatttatgatgctatagaaaagtacagaaagaaa
ggtataaacacatatataggagataccactgttgcacatattgttaagagacttaattgt
aagggaatattaatcgaatctagagaagaaaacatacttagagccattcaacaagcagaa
caaatactcgaagcaaccaaggatgaacaaaaaagaagattacagatagaagctatgaca
gattttgtacatgatggaataataacagttgataaaaattttaaaataacattatttaat
aagagtgctgaaaaaatatttggtataaaaaaagaaaatgcactttatcataatgttgta
gatgttatcccaaacacagttcttccacaagtagttgagactatggaacctcaaattggt
gaaatacaaaatatagggagtacaaaaattattacaaatagagttccaatcattgttgat
ggtcagattcaaggggctgtttcaacatttcaagatagcaaggagataagttcttttgaa
catacaataagaaggagcttattaagcaaaggtctatctgctaaatacacttttgatgat
ataattcatgctagtaaaaagacaaaagattgtatagaacttgcaaaaaaatatgcttgt
tatgatactcctatgattattactggagaatctggagttggtaaagaactattttgtcaa
agtatacataactatagtaagcgtaaaaatgcaccttttgttgctgtaaattgtgctgcc
atacctccatctctaatagagagtgagttttttggttatgaggaaggttcatttacaggt
gctagaaaaaaaggtaaagcaggtgtattcgaactagcacatgaaggcacaatcttccta
gatgaaataagtgaaatccctcttgaacttcaaggtcgattattgagggtattgcaggaa
aaacaagttatgagaattggtggtgataaagttattcctatagatgtaaaaattatctgt
gcttcaaataaagacttaaaaaatatgatgcgcaatggtttatttagacaagacctttat
tttagaataaatatactaacattatatcttccttcattaaaagaaagaaaagaagatatt
ataaaattatcagaattttttatacataaatattcaagcaaatacaataaaacgccttta
attatcactccaaatattaaaaaggcacttcttgaacgagaatatgaaggtaatataagg
gaattggaaggtatgatggaaagggctgttattgtggaatcatttgactcgattttatta
gaaaagcttagcaatgaatatacaaataatatagttgataaagataatagtgattttgaa
tgcagtaatttagatttaaaaactttagaaaaaaaatatatctataaaatttataacgaa
aataatagaaatactacaaaaacctgtgaaattctaaagataactcgctccactctatgg
cgtaagttaaaagaaatagaagatgatgtttaa
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