Pseudoxanthomonas daejeonensis: MNQ95_06855
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Entry
MNQ95_06855 CDS
T08066
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Pathway
pdd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MNQ95_06855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdd03400
]
MNQ95_06855
Enzymes [BR:
pdd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MNQ95_06855
DNA repair and recombination proteins [BR:
pdd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MNQ95_06855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UNK58797
LinkDB
All DBs
Position
1513808..1517434
Genome browser
AA seq
1208 aa
AA seq
DB search
MSAQDAYLALPLSGVRAIEASAGTGKTFTLATLVVRLVLERTLPVERILAVTFTEAATQE
LRARVRRRLLLAADIAAGTPYDGASPEASLTAALIEAHVEASGEPREAVQRRLSAAADGI
DQAAVFTIHGFCARVLREHALESGQGFHAPELLANDLALREAIAADLWRAHTRDDDSVED
LAALWPQGHEALAQDLPLLVREAVLQPPLPAPLPDPMPALHAAAAALVESARTHGDGFRE
SLLAAVDGKVLHGGSYKVEWIEDLFAALRRWCAAGDPRRPFEHAKLPQLHRQTLQARTNG
KFAGRTPDSPLCGAVEDYAAALAAMGDYQEARRTTLLHRIREDARRRLAAQKQQLRVQTY
DDLIDRVADALDGTHADELARQLRAQYAIALVDEFQDTDPRQWRIFDRVFGAGNDDPALF
VIGDPKQAIYGFRGGDVETYLAARATAEQAPPLSHNFRSRPAVLGAIEALYAQADVAAGN
DDKLGPPFVDPRIEFHAVQPGGKRADADYLRDGTPAPALVLWQAPPPEQKAHSAGRSREL
ATSACVAAIYAVLTDARAGRAAIDGRPVQPGDIAVLVRKHSEATMIREALARVGIPAVAA
GRQSLFATAEAHELHVLLEALLHGGDEQRLRAALATVLVGEDAQRLATLEGDRPALRQWQ
DAALGWRERLDRGGPLALVSDLCAQHATRLLGLLDGERRLTNYLQLAEQLQEALRAAPGL
HGLVDWLEQAIAVASADDDAQLLRLESDARRVQVVTLHKSKGLEYPLVFLPFVGIGGKSP
EPGRRVVVHGGDGRVLHWKLQAATSGWADAAEAWKRAQRAEDARLLYVGLTRARDALWLA
TGAFYNHAQSPLWSMVQDPAALAARAPGSIAVDPKQAPASLPWLPPQAEGEVPPARRPTR
SLASDWWVYSFTQLANADTGHDPSSAATQPAAGGRDEPAAAEDAAALANADDGFDPRFAG
ARFGVVLHEVFEHADFTAWRDWRAGDPAPAGEHERVVEALRRGGYAADEVEAGIDVLTTL
AGQTLTVALPEGVRLAELPGAQRRPEIEFQFALAPTRVDRLLALLHAHGLLRTRQGFGGR
RQLEGLMTGLIDLTYLHDGRWYVLDYKSNRLPAYNAPAMAEAMEHSEYPLQALVYTVALH
RWLRFRLGAAYDYARDFGGVRYLFCRGLDASRACSSGVSPGVQAWRFDPELVHAVDALFA
GLAQGAAA
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcaggacgcctacctcgcgttgccgctgtccggcgtgcgcgcgatcgaagcc
tcggccggcaccggcaagaccttcaccctggccaccctggtggtgcggctggtgctggaa
cgcacgctgccggtcgaacgcatcctcgccgtcaccttcaccgaggcggccacccaggaa
ctgcgtgcccgcgtacgccggcgcctgctgctggccgccgacatcgccgccggcacgccg
tacgacggcgccagtcccgaggcctcgctcaccgccgcgctgatcgaagcgcacgtggag
gcgagcggcgaaccgcgcgaggccgtgcagcgccgcctgagcgccgccgccgacggcatc
gaccaggccgccgtgttcaccatccatggcttctgcgcacgggtgctgcgcgagcacgcg
ctggaaagcggccagggcttccacgccccggaactgctggccaacgacctcgccctgcgc
gaggccatcgccgccgacctgtggcgcgcgcatacccgcgacgacgacagcgtcgaggac
ctcgccgcattgtggccgcagggtcacgaggcgctggcgcaggacctgccattgctggtc
cgcgaagcggtgctgcagccgccactgcctgctcccctgcccgacccgatgccggcactg
cacgccgccgccgcagcgctggtggaatcggcgcgcacccatggggacggcttccgcgaa
tcgctgctggcggcggtggacggcaaggtcctgcatggcggcagctacaaggtcgagtgg
atcgaagacctgttcgccgcgctgcgccgctggtgcgcggccggcgatccacggcggcca
ttcgagcatgccaagctgccgcagctgcaccggcagaccctgcaggcgcgcaccaacggc
aagttcgccgggcgcacgcccgactcgccgctgtgcggcgccgtggaggattacgccgcc
gcactggcggcgatgggcgactaccaggaggcgcgccgcaccacgctgcttcatcgcatc
cgcgaggacgcgcgacgccgcctggccgcgcagaagcagcagttgcgggtgcagacctac
gacgacctgatcgatcgggtcgccgatgcgctggacggcacgcacgccgacgagctcgcg
cggcagttgcgcgcgcagtacgccatcgccctggtcgacgagttccaggacaccgacccg
cgccagtggaggatcttcgaccgcgtgttcggcgccggcaacgacgacccggcgctgttc
gtgatcggcgatcccaagcaggccatctacggcttccgcggcggcgacgtggaaacctac
ctggccgcgcgcgccaccgccgaacaggcgccgccgctgtcgcacaacttccgctcccgt
cccgccgtactcggcgcgatcgaggcgctgtatgcgcaggccgacgtcgcggccggcaac
gacgacaagctgggcccgcccttcgtcgacccgcgcatcgaattccacgcggtgcagccc
ggcggcaagcgcgccgatgccgactacctgcgcgacggcacgcccgcaccggcgctggtg
ctgtggcaggcgccgccaccggagcagaaggcgcacagcgccggccgttcgcgcgaactc
gccaccagcgcctgcgtggccgcgatctacgccgtgctcaccgacgcccgcgccggtcgc
gccgcgatcgacggccggccggtgcagccgggcgacatcgccgtgctggtgcgcaagcac
agcgaggccacgatgatccgcgaggccctggcccgggtcggcatccccgcggtggccgcc
ggcaggcagagcctgttcgccaccgccgaggcgcacgaactgcatgtgctgctggaagcg
ctgctgcatggcggcgacgaacaacgcctgcgtgcggcgctggccacggtgctggtcggt
gaggacgcgcaacgcctggccacgctggagggcgaccgcccggcgttgcgccagtggcag
gacgccgctctcggctggcgcgagcgcctggaccgcggcggcccgctggccctggtcagc
gatctttgcgcgcagcacgccacccgcctgctcggcctgctcgatggcgagcgtcgcctg
accaactacctgcagctggccgagcagctgcaggaagcgctgcgcgccgcgccgggcctg
cacggcctggtcgactggctggagcaggcgattgccgtcgccagcgccgacgacgatgcg
cagctcctgcgcctggaatcggatgcgcgccgcgtgcaggtggtgaccctgcacaagagc
aagggactggagtacccgctggtgttcctgcctttcgtgggcatcggcggcaagtcgccg
gaacccggccgccgcgtggtggtgcatggaggcgatggccgggtgctgcactggaagctg
caggccgcgaccagcggttgggcggacgcggccgaggcgtggaagcgtgcgcagcgcgcc
gaggacgcacgcctgctctacgtaggcctgacccgcgcccgcgacgcgctgtggctggcc
accggcgcgttctacaaccacgcccagtcgccgttgtggtcgatggtgcaggaccccgcc
gcgctcgccgcgcgcgcacccggcagtattgccgtcgatccgaagcaggcgccggcgtcg
ctgccctggctgccgccgcaggccgaaggcgaagtgccgcccgcgcgtcgcccgacccgt
tcgctggccagcgactggtgggtctacagcttcacccagctggccaatgccgacaccggc
cacgatccttccagcgccgccacccagccggccgctggcggccgcgacgagcctgccgcg
gctgaggacgccgccgccctggcgaacgcggacgacggcttcgacccgcgcttcgccggc
gcgcgtttcggcgtggtcctgcatgaagtgttcgagcacgccgatttcaccgcctggcgc
gactggcgtgccggcgatcccgcaccggccggcgagcacgaacgcgtcgtcgaagccctg
cgccgcggcggctacgccgccgacgaagtcgaagccggcatcgacgtgctcacgacgctg
gccgggcagacgctcaccgtcgccctgcccgaaggcgtacgcctggccgagctgcccgga
gcgcagcgccgccccgaaatcgagttccagttcgcgcttgcacccacgcgcgtcgaccgc
ctgctcgccctgctgcacgcgcatggcctgctgcgcacgcgccagggtttcggcggccgc
cgccagctcgagggcctgatgaccggcctgatcgacctgacctatctccacgacggccgc
tggtacgtgctcgactacaagtccaaccgcctgccggcctacaacgcgccggccatggcc
gaagccatggagcacagcgagtacccgctgcaggcgctggtctacaccgtcgcactgcac
cgctggctgcgcttccgccttggcgcggcctacgactacgcgcgcgacttcggcggcgtg
cgctacctgttctgccgcgggctcgacgccagccgcgcctgctcgtccggtgtgtcgccc
ggcgtgcaggcctggcgcttcgatcccgaactggtgcacgcggtcgacgcgctgttcgcc
ggcctggcgcagggagcggcggcatga
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