Planococcus donghaensis: BCM40_15595
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Entry
BCM40_15595 CDS
T04451
Name
(GenBank) RNA polymerase factor sigma-70
KO
K27000
RNA polymerase sigma-H factor
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdg03021
]
BCM40_15595
Transcription machinery [BR:
pdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCM40_15595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
MSP1_C
HTH_38
HTH_30
Sigma70_ECF
Sigma70_r4
DUF6674
HTH_16
COG4_N
HTH_28
HTH_Tnp_Tc3_1
Motif
Other DBs
NCBI-ProteinID:
ANU24687
UniProt:
A0A1C7EMV5
LinkDB
All DBs
Position
133131..133781
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AA seq
216 aa
AA seq
DB search
MENHEQVQLQRFTDMTDEELVSLVHSGNTEALDFLITKFRPFVRMKARSYFLIGADKEDI
IQEGMIGLYKAIRDFKSDKLSSFRAFAELCIIRQIITAIKTATRQKHIPLNSYISLDKPI
YDEESDRTLMDVLTGNGVDDPEDLIIHNEEFQYMEEKMGEVLSELEREVLALYLDGQSYQ
EISEKLERHVKSIDNALQRVKRKLERHLQINEMPSS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatcatgagcaagttcagcttcaacgattcaccgacatgacagatgaagaactt
gtcagtttagtacacagtggaaacacggaggcattggattttttaataacgaagttccgg
ccttttgttcgaatgaaagcgcggtcgtatttcctgattggtgctgataaagaagacatt
attcaagaaggtatgattggtttatacaaggcgattcgggattttaagagcgataaatta
tcttcctttcgtgcatttgcagaactatgcattatccgtcaaatcattaccgccattaaa
acggcaacgcgtcaaaagcatattccgctgaattcatatatttccttggacaaaccaatt
tacgatgaagagtctgaccgcacgttaatggatgtattaaccggaaacggtgtagacgat
ccggaagatttgattattcataatgaagaatttcagtatatggaagagaaaatgggcgaa
gtacttagcgaattagaacgagaagtgctggcactttatcttgatggtcaatcttatcaa
gaaatctcagaaaagcttgagcgtcacgtgaaatcgattgataacgccttgcaacgagtc
aaacgaaaattagaacgccacttgcagattaatgagatgcctagctcttga
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