Paenibacillus donghaensis: B9T62_14585
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Entry
B9T62_14585 CDS
T04971
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9T62_14585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdh03400
]
B9T62_14585
Enzymes [BR:
pdh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B9T62_14585
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B9T62_14585
DNA repair and recombination proteins [BR:
pdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B9T62_14585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ASA21894
UniProt:
A0A2Z2K923
LinkDB
All DBs
Position
complement(3340214..3341029)
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AA seq
271 aa
AA seq
DB search
MPELPEMENYRKLLSQHLINVPITGVTVNREKTINLEAEAFREAIMGARIVFVERRAKHI
LFHLHDGRRLLLHLMLGGLLYYGPEAERPDRTTQVELAFGDQILYFMGLRLGYLHLLTVK
ESEAAMGKLGPELLDRRMNEQRFAAMLKGRRGALKSLLVNQHVMAGIGNCYADEIAYEAR
LLPSVLVQNLTEESIKRLYASLVKVLNEATEIGGYMEMPFMAGDTVTGSYNDQCKVYDRE
GEPCLRGGGTIVKIELSGRKVFYCPDCQHEQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaaatggagaattaccgcaagctgctaagtcagcatttgataaat
gtaccgattacaggcgtaaccgtaaaccgcgagaagacgattaacctggaggccgaagcc
ttccgggaagctataatgggagcaagaattgtgttcgtggaacggcgggcgaagcatatt
ctgtttcatctgcatgacgggcgcagattgctgctgcatctcatgctcggcggtctgctg
tactatggcccggaagcggagcggccggatcgaacgacacaggttgagctggcttttgga
gaccagattctctatttcatgggcctgcggctggggtatctgcatttgcttacggttaag
gagagcgaagctgcaatgggcaagctgggaccggagctgctggaccggagaatgaatgaa
cagcggttcgcagccatgctgaagggacggcgcggcgcactcaagagtctgctggtcaac
cagcatgtaatggctggaatcggcaactgctatgcggatgagattgcttacgaagcgagg
ctgctgccgtcggtgctggtccagaatctgaccgaggaatccatcaaacgtctgtatgcc
agcctagttaaggtgctgaatgaagctactgaaatcggcgggtatatggagatgccattt
atggccggagacaccgtcaccggttcctataacgaccagtgcaaagtatatgaccgtgaa
ggcgagccttgtctgcgcggtgggggaacaattgtcaaaattgaactgtccggacgaaag
gtattctattgcccggactgccagcatgagcaatag
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