KEGG   Paenibacillus donghaensis: B9T62_16395
Entry
B9T62_16395       CDS       T04971                                 
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh03030  DNA replication
pdh03430  Mismatch repair
pdh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B9T62_16395 (polC)
   03430 Mismatch repair
    B9T62_16395 (polC)
   03440 Homologous recombination
    B9T62_16395 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdh03032]
    B9T62_16395 (polC)
   03400 DNA repair and recombination proteins [BR:pdh03400]
    B9T62_16395 (polC)
Enzymes [BR:pdh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B9T62_16395 (polC)
DNA replication proteins [BR:pdh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B9T62_16395 (polC)
DNA repair and recombination proteins [BR:pdh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B9T62_16395 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI DNA_pol3_a_NII HHH_6 tRNA_anti-codon RNase_H_2 DNA_pol_A_exo1 YhfH STI1-HOP_DP
Other DBs
NCBI-ProteinID: ASA22223
UniProt: A0A2Z2KG95
LinkDB
Position
complement(3660529..3664851)
AA seq 1440 aa
MEQNTERRKRFELLMKQGEIPPALIDPYFLDGRIERVEISRGNRDWQIVIFKETLVPAQV
YRTFCLRMREKLQHIAKVSFLFQYDEQVDRADLVAEYWALFLEWVHREIPSVNGWLTRSV
QELKDGTLLLTMSDSTSLTLARKKGIDGAIIRFYEKYFGLVLKVKVQMAEHETPVNVYEE
LQQKVQQEERELVELMTASEPESSEEEGDPNEVVRLQVGYEIKEPPVPIVDIQDEEKKIT
IQGTIFGLDRKELRNGSTLFTYSLTDFSDSLQMKMFAKTKEDLKIMSQLANGKWVRARGK
VEYDRFMQIPELVMIPSDLSEVKAPVARKDNAPQKRVEFHLHTTMSTMDAVATIDAYIKT
AARWGHQAIAVTDHGGVQSFPDANHSAHKNKIKMLYGVEANVVNDSVNIVENAQPLDLKT
ATYVVFDIETTGLSITRNNITELAAIKMSEGKELGRYSTFVNPHEKIPYHIQQLTNITDE
MVRDAPDLEPVLHGFVDFVGDSILVAHNARFDMGFIQASLLKLGLPTLQNPSLDTLELAR
LLFPKMKNHRLNTLADKYKVLLESHHRAIDDTVALGGILTGLLADAEKLKNMTRLERLND
YVGNDLSTARPFHCCIYALNQTGKKNLYKLISLSHTQYFKRVPCIPKSKLEELRDGLLII
SGCERGEFFEAVLNKTVEEATEVAQFYDVLEIQPLTMYMHLVDKGFVASPDELRASLRKV
CEIGEQLNKPVIATGNVHYLEPRDKLFRDITINGITGFSPLKDQRKPDAHFRTTEEMLEE
FEFLGSEKSFEVVVKNTVELAERFEELELFPEKLYTPIIDGADEEIRETCYNTAKSIYGE
ELPEVVIARLEKELAPIIKYGFSANYLISERLVKKSNQDGYLVGSRGSVGSSVVATFLGI
SEVNPLPAHYICRNAECRHSEWFLDGSVPSGFDLPDKTCPDCGGKLTGEGQDIPFETFLG
FKGDKVPDIDLNFSGAYQPNAHNYTKVLFGPDNVFRAGTIGTVAEKTAFGFAKKYEEHHQ
KRWRGAEVGRLAAGCTGVKRSTGQHPGGIVVLPDYMEIEDITPVQYPADDVTSEWKTTHF
DYHAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTSIPMNDPKVMSMFNSTDSLGVRPEQ
IRTPVATYGVPEMGTRFVRQMLVEAQPSTFADLLQISGLSHGTGVWLGNAQDLIKNNTCN
IKTVIGCRDDIMLFLIYKAGMDAGLAFKITESVRKGKGLPPEWIDEMKKCKVPQWYIDSC
LKIQYMFPKAHAAAYVISAVRTAYFKLYYPIEYYATYFTVRAADFDIDLCCKGYEAIGRQ
IVEIEQKGFQALPKEKAMLPILEMALEMTARGFAFKNIDLYRSEADTFIVDGKSLIPPFS
ALAGIGENAAYNIAAAKDAGEFLSIEDFQQKSKASKTIVELLTGMGCFRGLPESNQLSLF
NT seq 4323 nt   +upstreamnt  +downstreamnt
atggaacagaacacggagagaagaaaaaggttcgagctcttgatgaagcaaggggaaata
ccgcctgcgctgatagatccctactttttggatggcaggattgaacgggtggagatcagt
cggggcaaccgggactggcagattgtaatcttcaaggagacgcttgttccggctcaggtg
taccgcaccttttgcctcagaatgcgggagaagctgcagcatattgccaaagtaagcttc
ctgtttcaatatgatgagcaggtggatagagcggacttggtggccgaatactgggcattg
tttctggagtgggtgcaccgcgagattccttcggtcaacgggtggctgacccgctccgtt
caggagctgaaggacggcacgctgctgctgacgatgagtgattccacttcccttacgctg
gcgcgcaaaaaaggcatcgacggggcgataatccgcttttatgagaaatatttcgggctt
gtgcttaaagttaaggtgcaaatggcggagcatgagactccggttaacgtatacgaagag
ctgcagcaaaaggttcagcaggaggaacgtgagctggttgagctgatgaccgcttctgag
ccggagagctcggaagaggaaggcgatccgaatgaagtggtgcgtctgcaggtgggttat
gagatcaaggaaccgccggttccaattgtcgatattcaggacgaagagaagaagattacg
attcagggcacgatttttggcctggaccgcaaggagctgcgcaacggcagtaccttgttc
acctacagtctgaccgatttcagtgattcgctgcagatgaagatgttcgccaagactaag
gaagacctgaagatcatgagtcagctggccaacggcaaatgggttagagctcgcggcaag
gtggaatacgaccggtttatgcagattccggagctggtgatgatcccttcggatctctct
gaggtaaaagcgcctgttgcccgcaaggacaacgctccgcagaaacgggtggagttccac
ctgcataccacgatgagcacgatggacgcggtggctacaatcgacgcgtatatcaagacg
gccgccagatggggccatcaggcgattgcggtcacggaccacggcggggtgcagtctttc
ccggatgccaaccattcggcgcataagaacaagatcaagatgctctatggcgtagaagcc
aatgtggtcaatgactcggtgaatattgtggagaatgcccagccgctggacctgaagaca
gctacctatgtcgtgttcgatatcgagaccaccggtctgtcgattacccgcaacaatatt
acggagctggcggcgatcaaaatgtccgagggcaaggaactcggccgttactcgactttt
gttaacccgcatgagaagattccttaccatatccagcaactcaccaatatcaccgatgaa
atggtcagggatgctcctgatctggagccggtgctgcatggcttcgttgatttcgtgggc
gacagcattctggtggcgcataatgccagattcgatatgggtttcattcaggcctcgctg
ctcaagctgggattgcccacgctgcagaacccttcgctggatacgctggagctggcacgg
ctgctattcccgaagatgaagaaccacaggctgaataccctggccgacaagtacaaagtg
ctgctggagagtcatcaccgtgcgattgacgataccgtggcgctaggggggattctgacc
ggcctgctggctgacgccgagaagctgaagaacatgacccggctggagcggctgaacgat
tatgtagggaatgatctgtccactgcccgcccgttccactgctgtatctatgcgctgaat
cagaccggcaagaagaatctgtacaagctgatttctctctcgcatactcaatatttcaaa
cgagtgccttgtattccgaagtccaagctggaggagctgcgggacggtttgctgattata
tcgggttgtgagcggggcgagttttttgaagccgtgctgaacaaaaccgtggaggaagct
acagaagtggctcagttctacgatgtgctggagatccagccgctgacgatgtatatgcat
ctggtggacaagggatttgtggcgagtccggacgagctgcgcgcttcgctgcgcaaggtc
tgcgagattggcgagcagctgaacaagccggtcattgccaccggcaacgtgcactatctg
gagccgcgcgacaagctgttccgggacatcacgatcaatggcattaccgggttcagcccg
ctgaaggaccagcgcaagccggatgcccatttccgcactaccgaggagatgctggaggaa
ttcgaattccttggcagcgagaagtcctttgaggtagtcgttaagaacaccgttgagctg
gctgagcgcttcgaggagctggagctgttcccggagaagctgtacacgcccattatcgac
ggtgccgacgaggagatccgcgagacctgctacaacacagcgaagtcgatttatggcgag
gagctgcctgaggtggttatagcgcgtctggaaaaagaactcgcgccgattatcaaatac
ggcttctcggccaactatctgatctcggagcgcttggttaaaaaatccaatcaggacggt
tatctcgtaggttcccgtggttccgtaggctcctcggtggtcgcgaccttcctcggcatc
tccgaagttaacccgctgccggcgcattatatctgccgcaacgcagaatgccggcacagt
gaatggttcctggacggcagtgtgcccagcggcttcgacctgcctgacaaaacctgcccc
gactgcggaggcaagctgaccggtgaagggcaggatattccgttcgagacgttcctcggg
ttcaagggcgacaaggttcccgatattgaccttaacttctcgggggcgtatcagccgaat
gcccataactacacgaaggtgctgtttggaccggacaatgtgttcagggcgggtacgatt
ggtacggtagctgagaagaccgcatttggattcgcgaagaaatatgaggagcatcaccag
aagcgctggcgcggagcggaggttgggcgtctcgcggcaggctgcacaggcgtcaagcgc
agcaccggccagcatcccggcgggattgttgtcttacctgattatatggagattgaagat
attacacctgtgcagtacccggcggatgatgtcacatccgagtggaagacgacacacttt
gactatcacgccttcgacgccaacctgctgaagcttgatatcctcggtcacgatgatccg
accatgatgcggatgctgcaggatctgaccggggtcgatccgacgtctattccaatgaac
gatcccaaggtgatgagcatgttcaactccacggattcgctgggtgtaagaccggagcag
atccgtacaccggtagccacctacggcgtgccggagatgggcaccaggttcgtgcgccag
atgcttgtggaagcacagccctccaccttcgccgatctgctgcagatttcggggctgtcc
cacggcaccggcgtgtggctggggaatgcgcaggatctgatcaagaacaacacctgcaac
atcaagaccgtaattggctgccgcgatgacatcatgctcttcctgatttataaggcaggc
atggacgcagggctggcctttaagattacggaaagtgtgcgtaaagggaagggtctgcct
cccgagtggatcgatgaaatgaagaaatgcaaggtgccgcagtggtacattgattcttgc
cttaagatccaatacatgtttccaaaagcgcatgcggccgcttatgtcatttccgccgtc
cgtactgcctacttcaagctgtattatccgatcgaatattatgcgacctactttacggta
agggcagctgatttcgatattgatctctgctgcaagggctatgaagccatcggccgccag
atcgttgagattgagcagaagggcttccaggcgctgccgaaggagaaggcgatgctgccg
attctcgaaatggcactggaaatgactgcgcgcggcttcgccttcaagaatattgacctc
taccgctccgaagccgatacctttattgtggacggcaagagcctgattcctccgttctcc
gcgctggcgggaatcggggagaatgcggcctataatatcgccgccgccaaggacgccgga
gagttcctttcgattgaggatttccagcagaaatccaaggccagcaagactattgtggag
cttctgaccggaatgggctgcttccgcggcttgcccgagagcaaccagctttccctgttc
tga

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