Paenibacillus donghaensis: B9T62_16395
Help
Entry
B9T62_16395 CDS
T04971
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pdh
Paenibacillus donghaensis
Pathway
pdh03030
DNA replication
pdh03430
Mismatch repair
pdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B9T62_16395 (polC)
03430 Mismatch repair
B9T62_16395 (polC)
03440 Homologous recombination
B9T62_16395 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdh03032
]
B9T62_16395 (polC)
03400 DNA repair and recombination proteins [BR:
pdh03400
]
B9T62_16395 (polC)
Enzymes [BR:
pdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B9T62_16395 (polC)
DNA replication proteins [BR:
pdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B9T62_16395 (polC)
DNA repair and recombination proteins [BR:
pdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B9T62_16395 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
YhfH
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
ASA22223
UniProt:
A0A2Z2KG95
LinkDB
All DBs
Position
complement(3660529..3664851)
Genome browser
AA seq
1440 aa
AA seq
DB search
MEQNTERRKRFELLMKQGEIPPALIDPYFLDGRIERVEISRGNRDWQIVIFKETLVPAQV
YRTFCLRMREKLQHIAKVSFLFQYDEQVDRADLVAEYWALFLEWVHREIPSVNGWLTRSV
QELKDGTLLLTMSDSTSLTLARKKGIDGAIIRFYEKYFGLVLKVKVQMAEHETPVNVYEE
LQQKVQQEERELVELMTASEPESSEEEGDPNEVVRLQVGYEIKEPPVPIVDIQDEEKKIT
IQGTIFGLDRKELRNGSTLFTYSLTDFSDSLQMKMFAKTKEDLKIMSQLANGKWVRARGK
VEYDRFMQIPELVMIPSDLSEVKAPVARKDNAPQKRVEFHLHTTMSTMDAVATIDAYIKT
AARWGHQAIAVTDHGGVQSFPDANHSAHKNKIKMLYGVEANVVNDSVNIVENAQPLDLKT
ATYVVFDIETTGLSITRNNITELAAIKMSEGKELGRYSTFVNPHEKIPYHIQQLTNITDE
MVRDAPDLEPVLHGFVDFVGDSILVAHNARFDMGFIQASLLKLGLPTLQNPSLDTLELAR
LLFPKMKNHRLNTLADKYKVLLESHHRAIDDTVALGGILTGLLADAEKLKNMTRLERLND
YVGNDLSTARPFHCCIYALNQTGKKNLYKLISLSHTQYFKRVPCIPKSKLEELRDGLLII
SGCERGEFFEAVLNKTVEEATEVAQFYDVLEIQPLTMYMHLVDKGFVASPDELRASLRKV
CEIGEQLNKPVIATGNVHYLEPRDKLFRDITINGITGFSPLKDQRKPDAHFRTTEEMLEE
FEFLGSEKSFEVVVKNTVELAERFEELELFPEKLYTPIIDGADEEIRETCYNTAKSIYGE
ELPEVVIARLEKELAPIIKYGFSANYLISERLVKKSNQDGYLVGSRGSVGSSVVATFLGI
SEVNPLPAHYICRNAECRHSEWFLDGSVPSGFDLPDKTCPDCGGKLTGEGQDIPFETFLG
FKGDKVPDIDLNFSGAYQPNAHNYTKVLFGPDNVFRAGTIGTVAEKTAFGFAKKYEEHHQ
KRWRGAEVGRLAAGCTGVKRSTGQHPGGIVVLPDYMEIEDITPVQYPADDVTSEWKTTHF
DYHAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTSIPMNDPKVMSMFNSTDSLGVRPEQ
IRTPVATYGVPEMGTRFVRQMLVEAQPSTFADLLQISGLSHGTGVWLGNAQDLIKNNTCN
IKTVIGCRDDIMLFLIYKAGMDAGLAFKITESVRKGKGLPPEWIDEMKKCKVPQWYIDSC
LKIQYMFPKAHAAAYVISAVRTAYFKLYYPIEYYATYFTVRAADFDIDLCCKGYEAIGRQ
IVEIEQKGFQALPKEKAMLPILEMALEMTARGFAFKNIDLYRSEADTFIVDGKSLIPPFS
ALAGIGENAAYNIAAAKDAGEFLSIEDFQQKSKASKTIVELLTGMGCFRGLPESNQLSLF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaacacggagagaagaaaaaggttcgagctcttgatgaagcaaggggaaata
ccgcctgcgctgatagatccctactttttggatggcaggattgaacgggtggagatcagt
cggggcaaccgggactggcagattgtaatcttcaaggagacgcttgttccggctcaggtg
taccgcaccttttgcctcagaatgcgggagaagctgcagcatattgccaaagtaagcttc
ctgtttcaatatgatgagcaggtggatagagcggacttggtggccgaatactgggcattg
tttctggagtgggtgcaccgcgagattccttcggtcaacgggtggctgacccgctccgtt
caggagctgaaggacggcacgctgctgctgacgatgagtgattccacttcccttacgctg
gcgcgcaaaaaaggcatcgacggggcgataatccgcttttatgagaaatatttcgggctt
gtgcttaaagttaaggtgcaaatggcggagcatgagactccggttaacgtatacgaagag
ctgcagcaaaaggttcagcaggaggaacgtgagctggttgagctgatgaccgcttctgag
ccggagagctcggaagaggaaggcgatccgaatgaagtggtgcgtctgcaggtgggttat
gagatcaaggaaccgccggttccaattgtcgatattcaggacgaagagaagaagattacg
attcagggcacgatttttggcctggaccgcaaggagctgcgcaacggcagtaccttgttc
acctacagtctgaccgatttcagtgattcgctgcagatgaagatgttcgccaagactaag
gaagacctgaagatcatgagtcagctggccaacggcaaatgggttagagctcgcggcaag
gtggaatacgaccggtttatgcagattccggagctggtgatgatcccttcggatctctct
gaggtaaaagcgcctgttgcccgcaaggacaacgctccgcagaaacgggtggagttccac
ctgcataccacgatgagcacgatggacgcggtggctacaatcgacgcgtatatcaagacg
gccgccagatggggccatcaggcgattgcggtcacggaccacggcggggtgcagtctttc
ccggatgccaaccattcggcgcataagaacaagatcaagatgctctatggcgtagaagcc
aatgtggtcaatgactcggtgaatattgtggagaatgcccagccgctggacctgaagaca
gctacctatgtcgtgttcgatatcgagaccaccggtctgtcgattacccgcaacaatatt
acggagctggcggcgatcaaaatgtccgagggcaaggaactcggccgttactcgactttt
gttaacccgcatgagaagattccttaccatatccagcaactcaccaatatcaccgatgaa
atggtcagggatgctcctgatctggagccggtgctgcatggcttcgttgatttcgtgggc
gacagcattctggtggcgcataatgccagattcgatatgggtttcattcaggcctcgctg
ctcaagctgggattgcccacgctgcagaacccttcgctggatacgctggagctggcacgg
ctgctattcccgaagatgaagaaccacaggctgaataccctggccgacaagtacaaagtg
ctgctggagagtcatcaccgtgcgattgacgataccgtggcgctaggggggattctgacc
ggcctgctggctgacgccgagaagctgaagaacatgacccggctggagcggctgaacgat
tatgtagggaatgatctgtccactgcccgcccgttccactgctgtatctatgcgctgaat
cagaccggcaagaagaatctgtacaagctgatttctctctcgcatactcaatatttcaaa
cgagtgccttgtattccgaagtccaagctggaggagctgcgggacggtttgctgattata
tcgggttgtgagcggggcgagttttttgaagccgtgctgaacaaaaccgtggaggaagct
acagaagtggctcagttctacgatgtgctggagatccagccgctgacgatgtatatgcat
ctggtggacaagggatttgtggcgagtccggacgagctgcgcgcttcgctgcgcaaggtc
tgcgagattggcgagcagctgaacaagccggtcattgccaccggcaacgtgcactatctg
gagccgcgcgacaagctgttccgggacatcacgatcaatggcattaccgggttcagcccg
ctgaaggaccagcgcaagccggatgcccatttccgcactaccgaggagatgctggaggaa
ttcgaattccttggcagcgagaagtcctttgaggtagtcgttaagaacaccgttgagctg
gctgagcgcttcgaggagctggagctgttcccggagaagctgtacacgcccattatcgac
ggtgccgacgaggagatccgcgagacctgctacaacacagcgaagtcgatttatggcgag
gagctgcctgaggtggttatagcgcgtctggaaaaagaactcgcgccgattatcaaatac
ggcttctcggccaactatctgatctcggagcgcttggttaaaaaatccaatcaggacggt
tatctcgtaggttcccgtggttccgtaggctcctcggtggtcgcgaccttcctcggcatc
tccgaagttaacccgctgccggcgcattatatctgccgcaacgcagaatgccggcacagt
gaatggttcctggacggcagtgtgcccagcggcttcgacctgcctgacaaaacctgcccc
gactgcggaggcaagctgaccggtgaagggcaggatattccgttcgagacgttcctcggg
ttcaagggcgacaaggttcccgatattgaccttaacttctcgggggcgtatcagccgaat
gcccataactacacgaaggtgctgtttggaccggacaatgtgttcagggcgggtacgatt
ggtacggtagctgagaagaccgcatttggattcgcgaagaaatatgaggagcatcaccag
aagcgctggcgcggagcggaggttgggcgtctcgcggcaggctgcacaggcgtcaagcgc
agcaccggccagcatcccggcgggattgttgtcttacctgattatatggagattgaagat
attacacctgtgcagtacccggcggatgatgtcacatccgagtggaagacgacacacttt
gactatcacgccttcgacgccaacctgctgaagcttgatatcctcggtcacgatgatccg
accatgatgcggatgctgcaggatctgaccggggtcgatccgacgtctattccaatgaac
gatcccaaggtgatgagcatgttcaactccacggattcgctgggtgtaagaccggagcag
atccgtacaccggtagccacctacggcgtgccggagatgggcaccaggttcgtgcgccag
atgcttgtggaagcacagccctccaccttcgccgatctgctgcagatttcggggctgtcc
cacggcaccggcgtgtggctggggaatgcgcaggatctgatcaagaacaacacctgcaac
atcaagaccgtaattggctgccgcgatgacatcatgctcttcctgatttataaggcaggc
atggacgcagggctggcctttaagattacggaaagtgtgcgtaaagggaagggtctgcct
cccgagtggatcgatgaaatgaagaaatgcaaggtgccgcagtggtacattgattcttgc
cttaagatccaatacatgtttccaaaagcgcatgcggccgcttatgtcatttccgccgtc
cgtactgcctacttcaagctgtattatccgatcgaatattatgcgacctactttacggta
agggcagctgatttcgatattgatctctgctgcaagggctatgaagccatcggccgccag
atcgttgagattgagcagaagggcttccaggcgctgccgaaggagaaggcgatgctgccg
attctcgaaatggcactggaaatgactgcgcgcggcttcgccttcaagaatattgacctc
taccgctccgaagccgatacctttattgtggacggcaagagcctgattcctccgttctcc
gcgctggcgggaatcggggagaatgcggcctataatatcgccgccgccaaggacgccgga
gagttcctttcgattgaggatttccagcagaaatccaaggccagcaagactattgtggag
cttctgaccggaatgggctgcttccgcggcttgcccgagagcaaccagctttccctgttc
tga
DBGET
integrated database retrieval system