Parabacteroides distasonis: BDI_1881
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Entry
BDI_1881 CDS
T00549
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi00550
Peptidoglycan biosynthesis
pdi01100
Metabolic pathways
pdi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDI_1881
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BDI_1881
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
BDI_1881
Enzymes [BR:
pdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BDI_1881
Peptidoglycan biosynthesis and degradation proteins [BR:
pdi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BDI_1881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABR43616
UniProt:
A6LD52
LinkDB
All DBs
Position
complement(2236835..2238703)
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AA seq
622 aa
AA seq
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MENNTKYEFENRRYVLGGAVILLVIIFIIRLFILQVVDNDYKAWADSNAFLKKTLYPSRG
MMYDRNGKLLVYNQPAYDVMLIMREIQPFDTLDFCDVLGITKEQFLKRIADIKNRRLNPG
YSSYVPQVFMNQLSAQEYGVLQEKLYKFPGFYIQNRTIRQYEYPNAALVLGNIGEVNRKD
IESDSYYTQGDYSGRTGIEQSYEEYLRGVKGVEILLRDAHGRIKGRYEEGLHDIQPESGK
NLKLSLDMDLQAYGEKLMQNKLGGIVMIEPETGEVLCMVSAPTYDPSILIGRQRGKNYVA
LQKDPLKPLFNRPLMAQYPPGSTFKPTQGLIFLQEGVITPETQYTCAHGYTFRGGKPACH
GHPSPLNLVGALATSCNSFFPWGLHDMIDSRKRYPSVQEAFEVWKNHMVSMGYGYKLGID
LPGEKRGFIPNSKFYDKVYRGRWNSSTVISIAIGQGEILATPLQICNLAATVANRGYYIT
PHVVKEIQDTPLDTLYSKRHYTSVDTHYYSYIAEGMRGAVTGTAYGGTCRGAALPDIEVC
GKTGTSENPHGKDHSIFMGFAPYQKPKVAIAVFVENAGFGATYAVPIGKLMLEKYLKGEI
SEANKATEEYIMNAVILPNNAL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtggagaataataccaagtatgagtttgagaacaggcgctatgtcttaggtggggcggtg
atcctgttggttatcatctttattatccgtttgttcatccttcaggtggtcgacaacgat
tataaagcttgggcggatagtaacgctttcttgaaaaagaccttatatccttcccgaggc
atgatgtacgaccgtaatggtaaattattggtctataaccagcccgcttacgacgtgatg
cttatcatgcgtgagatacagcctttcgataccctcgatttctgcgatgtgctgggcatc
acgaaagagcaattcctcaaacgtatagcggatattaagaaccggcggttaaatcccggt
tattcttcctatgtccctcaagtatttatgaaccagctttccgcgcaggaatatggcgtg
ttgcaggagaagttatacaaatttcccggcttctatatacagaatcgcacgatccgccaa
tacgagtatcccaatgccgctcttgtgctgggaaatatcggcgaggtaaaccggaaagat
atagagagtgactcttattatacacaaggcgattactccggcaggaccgggatcgaacaa
tcgtacgaggaatatttgcggggcgtgaagggtgtcgagatcctgttgcgtgacgctcac
ggacgtatcaaggggcgatacgaggaaggcctgcacgatatccagccggaatccggcaaa
aacttgaaattatccttggatatggacttgcaggcttatggggagaagttaatgcagaat
aaattagggggtatcgtgatgatagagccggagacaggggaggtgctttgtatggtttcc
gcccctacgtatgatccgagtatcttgatcgggcgccagcggggaaagaactacgtggct
ttgcagaaggacccgttgaaacctctgttcaaccgtccgctcatggcgcaatatcctccc
ggatctacttttaaaccgacccaaggtttgatcttcttgcaagaaggtgtgattaccccg
gaaactcaatatacctgtgcgcatggatacaccttccggggtggtaagccggcttgccac
gggcatccgtctcctctgaatctggtcggggcgttggcgacctcttgtaactcttttttc
ccttggggactgcatgatatgatcgacagccggaagcgatatccctcggtacaggaggct
tttgaggtttggaagaatcacatggtctcaatgggatatggctataagttgggaattgat
cttccgggagagaagcgagggttcattccgaatagtaagttctacgataaggtgtaccgg
ggacgttggaattccagtacggttatctcgatcgctatcggtcagggtgagatattggct
acgcctttgcaaatctgtaatttggcggctactgtcgctaatcggggatattatattact
ccgcatgtcgtaaaagagattcaagacactccgctggatacattatatagtaagaggcat
tatacatcggtggatacgcattattatagttatattgccgagggtatgcgaggggctgtt
acgggaaccgcttatggtggaacctgtcgtggggcggctttaccggatatcgaggtttgt
ggaaagacgggaacgtcggagaatccgcatggtaaggaccattctatttttatgggattc
gctccttatcaaaagccgaaggtcgccattgccgtgtttgtggaaaacgccggattcggt
gctacctatgcggtgcctatcggtaaattgatgttggagaaatatttgaaaggagaaata
tccgaggctaacaaggcgacggaggaatatattatgaatgccgtaatactaccgaacaat
gcgctatag
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