Phyllostomus discolor (pale spear-nosed bat): 114497584
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Entry
114497584 CDS
T07739
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114497584 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdic00536
]
114497584 (COL13A1)
Glycosaminoglycan binding proteins [BR:
pdic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114497584 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114497584
NCBI-ProteinID:
XP_035882753
EnsemblRapid:
ENSPDIG00005023476
UniProt:
A0A7E6DU63
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All DBs
Position
5:complement(126544154..126690874)
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AA seq
680 aa
AA seq
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MVAERARKAAAAGARGPGELGAPGAVALAVASAERCARLPSPGSFGLLALTLCSLALSLL
THFRTTELQARVLRLEAECGEQQMETAILGRVNQLLDEKWKLHSRRRRETPKTSPGCHCP
PGPPGPMGRPGLPGDKGAIGMPGRVGIKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGYPGPKGEMGLAGPRGQPGPQGEKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQGQAGTQGPPGPPGPPGPSGPLGHPGLPGPMGPRGFPGPPGPKGDPGI
QGHHGRKGERGMPGMPGKHGAKGAPGIAVAGLKGEPGTPGPKGEKGAAGSPGLLGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGRAGPPGQQGDKGDPGAPGEQGPAG
PQGSKGEPGKGEMVDCNASINEALQEIQTLTLIGPPGPPGQIGPPGAPGTPGQKGEIGLP
GPPGHDGEKGPRGKPGDVGPPGPQGPPGKPGPAGIKGDDGHPGSPGEKGEKGETGQTGPP
VPGPPGPEGPPGPPGPQGIPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGTPGPIGVPG
PAGPKGERGSKGDPGVTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPG
LDAPCPLGEDGLPVQGCWNK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagagcgcgctcgaaaagcggcagctgcgggtgcccgaggccctggggaactg
ggcgctcctggggccgtggctctggcggtggcgtcggctgagcgctgcgcgcggctgccg
agcccggggtccttcgggctgctggcgctgaccctttgctcgctcgcgctcagcctgctc
acccactttcggaccacggagctgcaggcccgggtgctgcgcctggaagcggagtgtggg
gagcagcaaatggagacagctattttgggacgagtcaaccaactgctggatgagaaatgg
aagctccactctcggagacgccgggagaccccgaagacatctccagggtgtcattgccca
ccaggacctcctggtcctatgggaagacctggcctcccgggggacaaaggtgccattggg
atgcctggacgtgtgggaataaagggccaaccaggtgagaagggggccccaggagatgct
gggatgtccatcatcggtccccgtggcccccctggtcagccgggcactcgaggcttccct
ggatttccgggtcccattgggctcgatgggaaaccgggctaccccggaccaaaaggggag
atgggcctggcgggtccccgaggacagccgggacctcaaggagaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccagtcataaaaaggcggaccttccagggtgaacagggccaggccggtacccaaggc
ccaccagggccaccgggcccccctggacctagtggacctctggggcatccaggactgcca
gggcctatggggccacgtggctttcctgggcctccaggaccaaagggagacccgggcatc
cagggccaccacggccggaagggagaacggggcatgccagggatgccgggcaaacatgga
gcaaagggggctcctggcatcgccgtggctgggttgaagggtgaaccagggaccccagga
cccaagggtgagaagggggctgcgggctccccggggctgctcggcctcctggggcagaag
ggagagaaaggcgacgccggcaactccattggaggaggcagaggggagcccggcccccca
gggctccccgggcccccagggccaaagggagaagctggtgtcgatggccgggccggcccc
cctggacagcagggagacaagggggaccctggagcacctggagaacagggaccagctggc
ccccagggctccaagggggaaccggggaaaggagagatggtggattgcaatgccagtatc
aacgaggccctccaggagatccagacgctgaccttgatcgggccccctggtcctcctgga
caaatcggccctcccggagctccggggactccaggccagaagggggagattggactgcca
ggccctccaggacacgatggagaaaagggacctcgaggcaaaccaggagacgtgggccct
cccggtccccaaggccccccaggaaagccagggcctgcaggaataaagggagatgatgga
cacccggggagcccaggagagaagggggagaaaggggagacggggcagaccggcccaccg
gttcctgggccgccagggccagaggggccgcccggacctccggggccccaaggcattccc
ggaccaaagggagaagcaggcctggatggagcaaaaggagagaagggtgtccagggagaa
aaaggagaccgaggtcctctgggattgcccggcactccaggaccaatcggagttccaggc
cccgcgggaccaaagggcgagaggggcagcaaaggcgaccccggggtgacaggaccaacg
ggagcagctgggcttcctggtttgcatggaccacccggggacaaaggaaaccggggggaa
agggggaagaaaggctctagagggcctaaaggggataagggagaccaaggagcacctgga
ttagatgccccctgtccgttgggcgaagacggcttaccagtccagggctgctggaacaag
tga
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