Paracoccus sediminicola: PAF18_08555
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Entry
PAF18_08555 CDS
T09284
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdim03009
]
PAF18_08555
Enzymes [BR:
pdim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PAF18_08555
Ribosome biogenesis [BR:
pdim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PAF18_08555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WBU55582
LinkDB
All DBs
Position
1729133..1730188
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AA seq
351 aa
AA seq
DB search
MSRVMPELILTIPDGVADRIDKALAELVPEEAALSRSRLSKLIADGAVSGPGGLVSTPKL
KVAPGECYVIALPEPAPVETLPQAIPLNIAYEDDDLIVIDKPAGMVVHPAPGSPDGTLVN
ALLHHCAGSLSGIGGEARPGIVHRIDKDTSGLLVAAKSDRAHHGLAAQFEAHSADRAYLA
LAHGVIDAADARLRGTRGIGFEPGGVLKITSRLDRHPSDRQKQAVFFDGARGRHAVTRAK
MLERFGTPPAAMLVECRLETGRTHQIRVHMAHAGLGLIGDPVYGGARKASARALGAAAEK
AAQFPRQALHAARLGFDHPLTGAHLEFTSHLPADMQALLTSLRGTGISQPR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgtcatgcctgagctgatcctgaccattcccgacggcgttgccgaccgcatt
gataaggcgcttgccgagcttgtgccagaggaggcggcgctgtcacgctctcgcctgtcg
aagctgatcgccgatggcgcggtcagcgggcccggtgggttggtctcgacgccgaaactg
aaagtcgcgccgggcgagtgctatgtcatcgccctgcccgagcccgccccggtcgagacg
ctgccgcaggccatcccgctgaacatcgcctatgaagatgacgatctgatcgtgatcgac
aagcccgccgggatggtcgtccaccccgcgcccggcagcccggatggcacgctggtcaac
gcgttgctgcatcactgcgctggcagcctttccgggatcggcggcgaggcgcggcccggc
atcgtgcaccggatcgacaaggacacctcgggtctgctggtcgctgcgaaatcggatcgc
gcccatcacgggctggctgcgcagttcgaggcccacagcgccgaccgtgcctatctcgcg
ctcgcacacggggtgatcgacgccgccgatgcgcggctgcgcggcacgcgcgggatcggg
ttcgagccggggggcgtgctgaagatcacctcgcgcctcgaccgccacccgagtgatcgg
cagaaacaagcggtgttcttcgacggcgcacggggccgccacgcggtgacgcgggcgaag
atgctggaacgtttcggcactccacccgccgcgatgctggtcgaatgccggctggaaacc
ggccgcacccatcagatccgggtgcatatggcccatgccgggctcgggctgatcggcgat
ccggtctatggcggggcgcggaaggcctcggcccgggcgctcggcgcggcggcagagaag
gcggcgcaattcccgcgccaggcgcttcacgcggcccggctgggcttcgaccacccgctc
accggcgcccatctggaattcacttcacacctgcctgccgatatgcaggctctgctgacc
agcctgcgcggaaccggcatttcacaaccgcgttga
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