KEGG   Paracoccus sediminicola: PAF18_08560
Entry
PAF18_08560       CDS       T09284                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
pdim  Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdim03021]
    PAF18_08560 (rpoH)
Transcription machinery [BR:pdim03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PAF18_08560 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_19 HTH_11 GvpK
Other DBs
NCBI-ProteinID: WBU55583
LinkDB
Position
1730208..1731113
AA seq 301 aa
MANYTNLPAPSPEQGMNRYLQEIRKFPLLEPEEEYMLAKAWTDHEDSEAAHKLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPERGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTSGQKKLFFNLRKAKNRIGAMEEGDLRPENVAQIANDLNVTEQEVIDMNRRM
AGSDASLNATVGSADGDSTAQWQDWLEDEDANQAEAYAEADELNLRREMLVKAMDVLNDR
EKDILMERRLRDDPLTLEELSGRYDVSRERIRQIEVRAFEKLQERMRNLASEKGMTVEND
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaaattacacgaatcttcccgccccgagccccgaacaggggatgaaccgctatctt
caggaaatccggaagttcccgcttctggaaccggaagaggaatacatgctcgccaaggcc
tggaccgatcacgaggacagcgaggcagcgcataagcttgtcacctctcacctgcgcctc
gcggccaagatcgccatgggctatcgcggctatggcctgccgcaggccgaggtgatctcc
gaggcgaatgtcgggctgatgcaggcggtgaagcggttcgatcccgagcgcggtttccgg
ctggcgacctatgcgatgtggtggatccgcgcctcgatccaggaatatatcctgcggtcg
tggtcgctggtgaagatgggcacgacatcgggccagaaaaagctgttcttcaacctgcgc
aaggccaagaaccgcatcggcgcgatggaggagggcgatctgcgccccgaaaacgtcgcc
cagatcgccaatgacctgaacgtgaccgagcaagaggtcatcgacatgaaccgccgcatg
gcggggtcggatgcgtcgctgaacgcgacggtcggctcggcggatggcgattcgacggcg
cagtggcaggactggctggaagacgaggacgccaatcaggccgaagcctatgccgaggcg
gatgagttgaacctgcgccgcgagatgctggtcaaggcgatggatgttctgaacgaccgc
gagaaggacatcctgatggagcgccgcctgcgcgacgatccgctgaccctcgaagagctc
tcgggccgatatgatgtcagccgcgagcgtatccgccagatcgaggtccgcgccttcgaa
aagcttcaggagcggatgcggaatctggccagcgaaaagggcatgaccgtggagaatgac
gattga

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