KEGG   Paracoccus sediminicola: PAF18_09870
Entry
PAF18_09870       CDS       T09284                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
pdim  Paracoccus sediminicola
Pathway
pdim02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pdim00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PAF18_09870 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdim02044]
    PAF18_09870 (trbF)
Secretion system [BR:pdim02044]
 Type IV secretion system
  Trb secretion system protein
   PAF18_09870 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: WBU55811
LinkDB
Position
1994158..1994847
AA seq 229 aa
MSIFKRPATHYGRTPEPETPYQRAAQAWDERIGSARVQARNWRLMAFGSLILSAGFASAL
VWQSARGTVVPWVVQVDNLGQAQTVAPANADYRPTDPQIAFHLGRFIEQVRAIPADAIIV
RQNWLRAYEWTTDRGAAALNDYARANDPFTKVGRQQIAVEVSSVIRASPNSFRVAWTERH
FENGQLSTTERWTAILTIVIQPPRDAERLRANPLGIYVNAISWSREMSQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcatcttcaaacgaccagcaacccattacggcaggacgccggaacccgagacgccc
tatcagagggccgcgcaggcatgggacgagcgcatcggctcggcccgcgtgcaggcgcgg
aactggcggctcatggccttcggctcgctgatcctgtctgccggctttgcctcggcgctg
gtctggcagtccgcacgcgggaccgtggtgccgtgggtggtgcaggtggacaatctcggt
caggcgcagaccgtcgcacccgccaatgccgactatcgcccgaccgatccgcagattgct
ttccatctcggccgcttcatcgagcaggtccgcgcgatcccggccgacgcgatcattgtc
cgccagaactggcttcgcgcctatgagtggaccacggatcgcggcgcggcggcattgaac
gattacgcccgcgccaatgaccctttcaccaaggtcggccgccagcagatcgccgtcgag
gtatcgagcgttatccgggcatctcccaacagcttccgcgtcgcgtggaccgaacgccat
ttcgagaacggccagctttccaccacggaacgatggacggccattctcaccatcgtcatc
cagccgccgcgcgacgccgagcgcctgcgcgcgaatccgctgggaatctacgtcaatgcg
atttcgtggtcgcgggagatgagccaatga

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