Paracoccus sediminicola: PAF18_15140
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Entry
PAF18_15140 CDS
T09284
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdim03009
]
PAF18_15140
03016 Transfer RNA biogenesis [BR:
pdim03016
]
PAF18_15140
Enzymes [BR:
pdim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
PAF18_15140
5.4.99.29 23S rRNA pseudouridine746 synthase
PAF18_15140
Ribosome biogenesis [BR:
pdim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PAF18_15140
Transfer RNA biogenesis [BR:
pdim03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
PAF18_15140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WBU56784
LinkDB
All DBs
Position
complement(3086162..3086809)
Genome browser
AA seq
215 aa
AA seq
DB search
MSFTYAPPADPPEILHDDHEILVVNKQAGLLSVPGRGPDKADCLIERLRGAFPTVLLVHR
LDMDTSGVMVFALTPHAQRHLSQQFETRRVKKTYIARVCGEVGDKTGTVELPLIVDWPNR
PRQKVDFEAGRPARTDWRVVKATPAETRIRLMPVTGRSHQLRVHMAETGHPILGDPLYAT
GAAADHPRLMLHAETLRLRHPDSGVQQSFSAKPPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcacctacgcgccaccggccgatccgcccgagatcctgcatgacgatcacgaa
attctcgtcgtcaacaagcaggccggactgctctcggtgccggggcgcggccccgacaag
gccgactgcctgatcgagcggctccgcggcgccttcccgaccgtgctgctggtgcaccga
ctggacatggacacatcgggggtgatggttttcgcgctcaccccgcatgcgcagcggcat
ttgtcgcaacagttcgagacgcgccgggtcaagaaaacctatatcgcccgcgtgtgcggc
gaagtcggcgacaagaccggcactgtcgagctgccgctgatcgtggactggcccaatcgc
ccccggcagaaggtcgatttcgaggccggccgtcccgcacgaaccgactggcgcgtggtc
aaggcgacgcctgccgagacgcggatccggctcatgccggtgaccgggcgcagccaccag
cttcgcgtgcatatggccgagacgggccatccgatcctgggagacccgctctatgcgacg
ggagcggcggcggaccatccgcggctgatgctccatgccgagaccttgcgcctgcgccat
cccgacagcggcgtgcagcagagcttttccgccaagccgcccttctga
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