Paraburkholderia dioscoreae: PDMSB3_1531.1
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Entry
PDMSB3_1531.1 CDS
T08115
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00450
Selenocompound metabolism
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PDMSB3_1531.1
Enzymes [BR:
pdio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PDMSB3_1531.1
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PDMSB3_1531.1
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
VVD32815
UniProt:
A0A5Q4YW14
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All DBs
Position
II:1577409..1579487
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AA seq
692 aa
AA seq
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MTTQTPTSKPVESVLPHDVPTAPPGGVPAGLPDPATLASLANAFFSALPGNAPQSGATPG
LAGTLPFTAPVTSEISNPAPAGSPLAGPGGTGTGVPGAALPQGHVPGANLLPSSPTHVLA
LGNRAPALAPHATAQNGLPDSVVTIAPALDPRFGGAALGVPEAHGAQRPSTGGAAPLAPA
SPVSSASASPFYFLGESGQPHSATTASPDIVVPVWSEVSAQSFGLPGVDQPLAEQRFPYD
RPVASHAAPLSKPAEHTGSSHYFLNLGEPSRSPGHAHGVPHAGPSAHPPFDVNAIRRDFP
ILQQRVNGRQLVWFDNAATTQKPQAVIDRLAYFYAHENSNIHRAAHALAGRATDAYEAAR
SKVQRFIGAGSPEEIIFVRGTTEAINLIAKTWGVKHVGEGDEIIVSHLEHHANIVPWQQL
AAQTGAKLRVIPVDDSGQVLLEEYRKLLNDRTKIVSVTQVSNALGTVVPVKEIVELAHRA
GAKALVDGAQSVSHMRVDVQALDADFFVFSGHKVFGPTGIGVVYGKRAILEDMPPWQGGG
NMIVDVTFERTLFQPPPSRFEAGTGNIADAVGLGAAIDYVQRIGIENIARYEHDLLAYAT
SVLQPVPGVRLIGTARDKASVLSFVLKGYETEEVGQALNEEGIAVRSGHHCAQPILRRFG
LEATVRPSLAFYNTCDEVDALVSVVRRLSSRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcagacacctacaagtaagcccgtggaaagcgtgctgccgcacgatgtgccg
accgctccgcctggaggcgtgcctgcgggattgcctgatcccgcaacgctggcttcgctg
gcgaatgcattcttctcggcgctgccgggcaatgcgccgcagtcaggcgcgacgcccgga
ctggccggcacgctgccgttcacggcgccggtgaccagcgagatcagcaatccggcgccg
gcgggttcgccgctcgcgggccctggcggcacgggcaccggcgtgcccggcgcggcgttg
ccgcaagggcatgtgcccggtgccaacctgctgccttcgtcgccgacgcatgttctcgcg
ctgggcaaccgcgcgcctgcgctcgcgccgcatgcaacagcgcagaacggcttgcccgat
agcgtcgtgaccatcgcgcccgcactcgatccgcgctttggcggagccgcgttgggtgtg
ccggaggcacacggcgcgcagcgtccgtccaccggtggtgctgcgccgcttgcgcccgct
tcgccggtatcatcggcatccgcatcgccgttctatttcctgggcgaatcgggccagcct
cactccgcgacaaccgcgtcaccggatatcgtcgtgccggtctggagcgaggtgagtgcg
caatcgttcggtctgccgggcgtcgatcagcctcttgccgagcaacgtttcccctatgac
cgtcccgttgcctcgcacgcggcaccgctgtcgaagccggcggaacacacgggcagctcg
cactatttcctgaatctgggcgagccgtcacgttccccgggccacgcgcacggcgtgccg
catgccggcccgtccgcgcatccgccgttcgatgtgaatgcgattcgccgcgacttcccg
attctgcagcagcgtgtcaacggccgtcagctggtgtggttcgacaatgccgcgaccacg
caaaaaccgcaggcggtgatcgaccggctggcgtatttctacgcgcatgaaaactcgaac
attcatcgggcggctcatgcgctggccggccgcgccactgatgcgtacgaagccgcgcgc
agcaaggtgcagcgtttcatcggcgcgggctcgccggaggaaatcatcttcgtgcgcggc
accaccgaagcgatcaacctgatcgcgaagacgtggggcgtgaagcatgtcggcgagggt
gacgagatcatcgtctcgcacctcgaacatcacgccaacatcgtgccgtggcagcagctt
gccgcgcaaaccggcgcgaagctgcgggtgattccggtcgacgacagcggccaggtgctg
ctcgaagaataccggaagcttctgaatgaccgcacgaagatcgtctccgtcacgcaggtg
tcgaacgcgctcgggacggtggtgccagtcaaggagatcgtcgaactggcgcatcgcgcg
ggtgcgaaggcgctggtcgacggggcgcagtcggtgtcgcacatgcgggtggacgtccag
gcgctcgacgcggacttcttcgtgttctcgggtcacaaggtgttcggtccgaccggcatc
ggcgtggtctacggcaagcgcgcgattctggaggacatgccgccgtggcagggtggcggc
aacatgatcgtggacgtcactttcgagcgcacgcttttccagccgccgccgagtcgtttc
gaagccggtaccggcaatatcgccgatgcagtgggtcttggcgcggccatcgattacgtc
caacggatcggcatcgagaatatcgcgcgctacgagcacgatctgctcgcgtatgcgacg
agcgtgctgcaaccggtgcccggtgtgcgtctgatcggcacggcgcgcgacaaggcgagc
gtcctgtccttcgtgctgaagggctacgagaccgaggaagtcggtcaggcgctcaacgaa
gagggcattgccgtgcgctcggggcatcactgtgcgcagccgatcttgcggcgctttggc
ctcgaagcgaccgtgaggccgtcgctcgcgttctataacacctgcgatgaagtcgacgcg
ctggtgtccgtagtgcgacgattgtcttcacgccgctga
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