Paraburkholderia dioscoreae: PDMSB3_1797.1
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Entry
PDMSB3_1797.1 CDS
T08115
Name
(GenBank) Putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K07577
putative mRNA 3-end processing factor
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
PDMSB3_1797.1
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Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
VVD33081
UniProt:
A0A5Q4ZL49
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Position
II:complement(1858984..1860135)
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AA seq
383 aa
AA seq
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MNIASDQADLADLVVARPEGLYCPAGDFHIDPWRPVERAVITHAHSDHARFGHRHYLASR
AGANVLLSRLPGISLQTLAYGERIDLNGTTVSLHPAGHVLGSAQLRIEHRGRVWVASGDY
KLDPDPTCDAFEPVRCDTFITESTFGLPIYRWDAPQTVFDGVDSWWRHNVAQGRASVLFC
YSFGKAQRVLASVDAGIGPIFCHGAVEPLNRAYREAGVRLPPVRLVSEMPAMDKAAFRQA
LIVAPPSAQGSAWLKRFGDYSDAFASGWMRLRGARRRRGVDRGFVLSDHADWPGLQTAIH
ATGAERVIVTHGSVEPMVRWLREHGLEAGAFETQYGDDTVEADAAGADETAATGSVSFEP
ESVGKQNESADKDVTPVDPASSA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatagcctctgaccaagcggacctcgcggacctggtggtcgcacggcccgaggga
ttgtattgcccggcgggcgacttccatatcgatccgtggcgccctgtcgaacgggccgtg
attacgcatgcgcattccgatcacgcacgcttcgggcatcggcactatcttgcgtcgcga
gcgggggcgaacgtgctgttgtcgcgtctgcccggcatttcgctgcaaactctggcgtat
ggcgagcgtatcgatctcaacggtacgaccgtgtcgctgcatcccgccggccacgtgctg
ggctcggcgcaattgcggatcgaacaccgcgggcgcgtctgggttgcgtcgggcgactac
aagctcgaccccgacccgacctgtgacgctttcgaaccggtgcgctgcgataccttcatt
accgagtcgaccttcggcctgccgatctatcgatgggacgcgccgcaaaccgtgttcgac
ggcgtcgattcctggtggcgtcataacgttgcgcaagggcgcgcttccgtgttgttctgc
tattcgttcggcaaggcgcagcgcgtgctggcaagtgtcgatgcgggcattgggccgatc
ttctgtcacggcgccgttgagccgctcaatcgcgcgtatcgggaggccggcgtgcgcttg
ccgccggtgcgtctcgtgagcgagatgccggcgatggacaaggcggctttccgtcaggca
ttgatcgtggcgccgccttccgcgcagggcagcgcatggctcaagcgcttcggcgactat
agcgacgcgttcgcgtcgggctggatgcgtctgcgcggcgcacgccgcagacgcggcgtc
gatcgtggcttcgtgctgtcggatcatgctgactggccgggcctgcaaacggccattcac
gcgacgggagccgaacgcgtgatcgtcacccacggatcggtcgagccgatggtgcgctgg
ttacgcgagcacggcctcgaagcgggcgcgtttgaaacgcaatacggcgacgatacggtc
gaagccgatgccgcgggtgcggacgaaacggccgccacgggtagcgtatcgttcgagccc
gagtcggtgggcaagcagaacgagtctgccgacaaagacgtcaccccggtcgatcccgcg
agtagcgcatga
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