Paraburkholderia dioscoreae: PDMSB3_1885.1
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Entry
PDMSB3_1885.1 CDS
T08115
Name
(GenBank) DNA-binding protein with HTH domain
Organism
pdio
Paraburkholderia dioscoreae
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Sigma70_r4
HTH_29
HTH_20
HTH_23
HTH_38
Terminase_5
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
VVD33169
UniProt:
A0A5Q4ZD22
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Position
II:complement(1951617..1952435)
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AA seq
272 aa
AA seq
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MRSWRISPPHRGEQISTSRAAELVMSISHADADALAASMLKTVGDTLPVSQCTIFAYEFD
ARPRTVSAADHRGGRFLRDVADRYATHFYALDGNRAIIGRSHERPARDALVLHQQQSDEI
ENEAYRAACYAQPNVSDRLSLLVQPVESVWLSINLYRDRAYGVFQPGELEHVESLAHLFA
HTAKGHYALNGQHQQGSAAAMLARVRRACPALTPRELDVLRGTLEGASAAEIAQRMGVKP
ASVITYQKRAYARLGISSQRQLFALCMVPERT
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcctggcgcatttctccaccgcaccgcggcgaacagatcagcacctcgcgtgcg
gccgagctcgtcatgtcgatctcgcatgcggatgccgacgcgcttgccgcaagcatgctg
aaaacagtcggcgacacgctgccggtttcgcaatgcaccatcttcgcttatgaattcgac
gcgaggccgcgcacggtttccgcggccgatcatcgcggcggccgttttctgcgcgacgtc
gccgatcgctatgccacgcatttctatgcgctcgacggcaaccgcgcgatcatcggccgc
tcgcacgaaagaccggctcgcgacgcattggtgctgcaccagcagcaaagcgacgagatc
gaaaacgaagcctatcgcgcggcctgctacgcacagccgaacgtgtccgaccggttatcg
ttgctcgtgcagcccgtggaaagcgtctggctgtcgatcaatctgtatcgcgaccgcgcc
tatggggtatttcagccgggcgaactggagcatgtggaaagcctcgcgcacctgttcgcg
cacacggccaagggccattacgcgctcaacggacagcatcagcaaggttcggccgccgcg
atgctggcgcgcgtcagacgtgcttgcccggccctcacgccgcgcgaactcgacgtgctg
cgcggcacgctggaaggcgcgagcgccgctgaaatcgcacagcgtatgggcgtcaagcct
gccagtgtaattacctatcagaagcgtgcttacgcgcgccttgggatatcgagccagcgc
cagttgttcgcgttgtgcatggtgcccgagcggacctga
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