Paraburkholderia dioscoreae: PDMSB3_2800
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Entry
PDMSB3_2800 CDS
T08115
Symbol
mutS
Name
(GenBank) methyl-directed mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PDMSB3_2800 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_2800 (mutS)
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PDMSB3_2800 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
VVD29256
UniProt:
A0A5Q4ZMQ2
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All DBs
Position
I:2860980..2863646
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AA seq
888 aa
AA seq
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MPAVEPKITPGMQQYLRIKAEHPGTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASA
GNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDA
ALLSDKSDVYLLAMCVAHNRRGVATSVGLAWLNLASGALRLAELAPDQVAAALERIRPAE
ILVADTPGDSASWTPPVNAGALTRVPVWHFDITSGTQRLCDQLEVAGLDGFGAHSLTCAC
GAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLRGTESPTLCSL
LDTCCTTMGSRLLRHWLHHPPRESAVAQARQQAIGALLDAPPGAGVDALRGALRQISDIE
RITGRLALLSARPRDLSSLRDTFIALPELRTQLAAVSPNADSLARIDASLEPPQACVELL
RRAVAEEPSAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIGNLRVEY
NKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERSL
YDALLQALLPFIPDCQRVASALAELDLLAAFGERARALDWVAPTFSPNAGIEIEQGRHPV
VEAQVEQFIANDCALTPERKLLLITGPNMGGKSTFMRQTALIALLAYVGSYVPARRAAFG
PIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALA
WAIARHLLAHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVSEGPAN
QSYGLQVAQLAGVPNAVIRAARKHLAHLEQQSAAQPAPQLDLFAAPMPMLLEDADDERES
KAEAAVPPAMQALVERLRGIDPNDLRPREALDLLYELHELAAVPDADH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcggtagagccgaaaattactccaggtatgcagcagtacctacgcatcaaggcg
gaacatcccggcacgctggtgttctaccggatgggcgacttctacgaactttttttcgaa
gacgcggaaaaagccgcgcgcctgctcgatctgacgctaacacagcgtggcgcgtcggcg
ggcaatccgatcaaaatggccggcgtgccgcatcacgcagtcgaacaatatctggccaag
ctggtcaagctcggcgaatccgttgcgatttgcgagcagatcggcgacccggcaacgtcg
aagggtccggtcgagcgcaaagtggtccgcgtggtcacgccgggcacgctcacggacgcc
gcgctgctgtccgacaagagcgacgtctacctgttggccatgtgcgtcgcgcacaatcgg
cgcggtgtcgcgaccagcgtcggtctcgcatggctgaatctggcaagcggcgcgctgcgc
ctcgctgaactcgcgccggaccaggtggcggccgcgctcgaacgcattcgtcccgcggaa
attctggtggccgacacgcccggcgactccgcaagctggacgccgccggtcaacgccggc
gccctcacccgcgtcccggtctggcacttcgacatcacctcgggcacgcagcgcttgtgc
gatcagctggaagtggccggactcgacggtttcggcgcgcattcgctgacctgcgcatgc
ggcgcggccggcgcgctgctgctgtatgccgccgccacgcaaggccagcaattgcgtcac
gtgcgcagcctgaaggtcgagtacgaatccgaatatatcggcctcgaccccgccacgcgc
cgcaatctcgaattgacggaaacactgcgcggcacggagtcgcccacgctgtgttcgctg
ctcgacacctgctgtacgacgatgggcagccgtctgctgcgtcactggttgcatcatccg
ccgcgcgaatcggcggtggcgcaggcgcgtcagcaggcgatcggcgctttgctcgacgcg
ccgccgggcgcgggcgtcgacgcgttgcgcggcgcgttgcggcagatctcggacatcgaa
cggatcaccgggcgtctcgcgctgctgtcggcgcggcctcgcgacctgtctagcctgcgc
gacaccttcatcgcgttgcccgagttgcgcacgcagctcgcggccgtttcgccgaatgcg
gattcgctggcccgcatcgacgcctcgctcgaaccgccgcaagcctgcgtcgaactgctc
aggcgcgcggtcgccgaggagccatcggcgatggtgcgcgacggcggcgtgatcgcgcgc
ggctacgatgcggaactggacgaattgcgagatatttcggagaactgcgggcagttcctg
atcgacctcgaaactcgcgagcgcgcacgcacgggcatcggcaatctgcgcgtcgagtac
aacaaggtgcatggcttctatatcgaagtcacgcgcggccagaccgacaaggtgccggac
gactatcgccgccgccagacgctgaagaacgccgaacgctacatcacgccggaactgaaa
acgttcgaggacaaagcgctgtccgcgcaggaacgcgcgctcgcccgcgaacgctcgctt
tacgacgcattgctgcaggcgctgctgccttttatcccggattgccagcgggtcgcctcg
gcgcttgccgaactcgatctgctggcggccttcggcgagcgtgcccgcgcgctggattgg
gtcgcgcccacgttctctccgaacgccggcatcgagatcgaacagggacggcatccggtt
gtggaagcgcaggtcgagcagttcatcgccaacgactgcgcgcttacgcccgagcgcaaa
ctgctgctgatcaccggcccgaacatgggcggtaaatccaccttcatgcggcagaccgcg
ctgatcgcgctgctcgcctatgtgggcagctatgtgcccgcgcggcgcgccgccttcggg
ccgatcgaccgtatcttcacccgtatcggcgcagcggacgacctcgccggcggccgctcc
accttcatggtcgagatgacagaagccgccgcgatcctgaacgacgccacgccgcaaagt
ctcgtgctgatggatgagatcggccgcggcacgtccaccttcgacgggctcgcgctggcg
tgggcgatcgcgcggcatctgcttgcgcacaacggctgccatacgctctttgccactcac
tacttcgaactgacgcaactgccggcggagtttccgcaggcggccaacgtgcacctgtcg
gcggtcgagcatgggcacggcatcgtgttcctgcacgcggtcagcgaaggtcccgccaat
cagagctacggcctgcaggtcgcgcaactcgccggcgtgccgaacgcggtgattcgcgcg
gcgcgcaaacatcttgcgcatctcgaacagcagtcggccgcgcagcccgcgccgcaactg
gatctgttcgccgcgcccatgccgatgctgctcgaagacgcggacgacgagcgtgagtcg
aaagccgaagcggctgtgccgcccgccatgcaggcgcttgtcgagcgtctgcgcggcatc
gatccgaacgatctgcggccgcgcgaagcactcgatctgctgtacgaattgcacgaactg
gccgccgtgccggatgcggatcattga
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