Paraburkholderia dioscoreae: PDMSB3_2986.1
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Entry
PDMSB3_2986.1 CDS
T08115
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_2986.1
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PDMSB3_2986.1
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_31
HTH_23
HTH_AsnC-type
DUF2073
CbiX
HTH_26
HTH_IclR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
VVD34270
UniProt:
A0A5Q4ZS83
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Position
II:3110670..3111725
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AA seq
351 aa
AA seq
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MSETVHLTAAARARIPDIARAAGVSTATVDRVLNGREGVRAVTAQRVLQAAAQLGYLLTP
EAPVASASKPMRIAFLLPAGTNRYLHMLGDYIDFAHDQWNALDMKCRVHYVESFNPKELA
DRLLHYGQRADGVVFMALEHPVVRDAVNALADQGVPAITLISDLSNARRLAYVGIDNRAA
GRTAALLLGRFMGPRPSGKIAMLAGSLNYRGHEEREIGFLHLIESTFPQVRVIGLREGHD
DSERNYMQTRKLLEQHPDLAGIYNSGGGSDGVARAIVEARSEQKILFVGHGLTPDTRALL
IDGTMDALITQTPQAMVGNCLRIFRNVREKRDALSDVKPVQFSIVLRENLP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacggttcacctcaccgccgctgcgcgtgcccgcattcccgacattgcgcgt
gccgccggtgtttcaaccgctacggtggatcgtgtgctcaatggccgcgagggcgtgcgc
gccgtcacggcacaacgcgtactgcaagcggccgcgcaactcggttatctgcttacgccg
gaggcgcccgtcgcgtcggcttcgaagccgatgcgcatcgcgttcctgctgcctgccgga
accaatcgctacctgcacatgctcggcgactacatcgacttcgcccacgatcagtggaac
gcgttggacatgaagtgccgcgtgcattacgtcgagagtttcaacccgaaggaactggcg
gaccgtctgctgcattacggacagcgtgcggatggcgtggtgttcatggcgctcgaacat
cccgtcgtgcgcgatgccgtgaatgcactggcggaccagggtgtgccggctattacgttg
atttcggatttatcgaatgcgcggcggctggcttatgtgggtatcgacaatcgcgcggca
ggacgtacggccgccttgctgctcgggcgcttcatgggcccccggccgagcgggaagatc
gcgatgctcgcgggcagcctcaactatcgcgggcatgaggaacgcgagatcggatttctg
catctgatcgaatcgacgttcccacaggtgcgcgtgatcggattgcgtgagggacacgac
gatagcgagcgcaactacatgcagactcgcaagctactggaacagcatcccgatctcgcc
ggcatctacaacagcggcggcggatcggatggcgtggcgcgcgcgattgtggaagcgcgc
tcggagcagaagatcctgtttgtcggtcacggcttgacgcctgatacgcgagcgctgctg
atcgacggcacgatggacgcgttgatcacgcaaacgccgcaagccatggtgggaaactgt
ctgcgcattttccgcaacgtgcgcgaaaaacgcgacgcattgagcgacgtgaagccggtg
cagttcagcattgttctgcgcgagaatctgccttga
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