Paraburkholderia dioscoreae: PDMSB3_3247.1
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Entry
PDMSB3_3247.1 CDS
T08115
Name
(GenBank) glycogen debranching enzyme-related protein
Organism
pdio
Paraburkholderia dioscoreae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDE_C
GDE_N
Glyco_hydro_100
GxGYxYP_N_3rd
Motif
Other DBs
NCBI-ProteinID:
VVD34531
UniProt:
A0A5Q4ZFE6
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Position
II:complement(3371007..3372989)
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AA seq
660 aa
AA seq
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MTRIERPFDITRLEDEWLEADGFGGFASGTVGTLRTRRYHALLLAATRAPGGRVVLVNGV
EAWLEANGKRYPLSMQRYVPDLIYPDLTASLIAFDTVPWPTWRVQLDTHLALTADVFVGK
ATRETVLRWRLQSAGDTAATSALTLKVRPLISGRDYHALHHENTAFNFTAQTSGDQACVS
WQPYGDRPVIQCATNGVYTHAPDWYRNFCYVRERERGLDFSEDLATPGVFSFNLADGAAV
MILSASSATSGTQSAGAKPAFAHATELARIEQQRRDALGSRLQRSADAYVVERNEGRTIL
AGFPWFTDWGRDTFIAMRGLLIASGRLDDAEAILLEWSGTLSEGMLPNRFPDYGDTPEYN
SVDASLWFIVAVHDYLATHHASAATQQRLQQASEAILRGYTEGTRFNIQASAADGLLSAG
TPGVQLTWMDAKVGDWVVTPRIGKPVEVQALWINALRIAASWNPHWQPAADRALQAFHER
FIDPSTQALFDNVDVDHVKGAIDRSIRPNQIFALGGLPFPLLDGAAARAVLDQVEAQLLT
PLGLRTLAPSDPAYRGHYGGQPLERDGAYHQGTAWPWLLGPFVEAWLRVHGGAADARMQA
KTRFLDPLYAHLDHAGLDHLSEIADGDAPHAPAGTPFQAWSLGELLRMEMLLARLPSAGA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcatcgaacgacctttcgacatcacgcgtctcgaagacgaatggctggaagcg
gacggcttcggcggtttcgcgtcgggcactgtcggcacgctgcgcacgcgccgttatcac
gcgttgctgctcgccgcaacgcgggcgcccggcgggcgcgtggtgcttgtcaacggcgtg
gaggcgtggcttgaggcgaacggcaagcgttatccattgagcatgcagcgctacgtgccg
gatctgatttatccggacctgaccgcgagtcttattgcattcgacaccgtgccgtggccg
acatggcgtgtgcaactcgacacgcatctcgcattgaccgctgacgtgtttgtcggcaaa
gcgacccgcgaaacggttttgcgctggcgtctgcagagcgctggagatacggctgcaaca
agcgcgctcacattgaaagtcaggccgctaatatcgggccgcgactaccacgcgctgcat
catgagaacaccgcgttcaacttcaccgcgcagacgagcggcgatcaggcgtgcgtaagc
tggcaaccgtacggcgatcggccggtgatccagtgcgcgacgaacggcgtctacacgcac
gcgccggattggtatcgcaatttctgctacgttcgcgagcgggaacgcggcctcgatttc
agcgaggatctggcgacgcctggcgtgttcagcttcaatctcgccgatggtgcagcggtg
atgattctcagcgcttccagtgccacgagcggcacgcaatcggcaggcgcgaaaccggca
ttcgcgcacgcaacagaactggcgcgcatcgagcaacagcgccgcgacgcgctcggctcg
cgcctgcaacgctcggccgatgcctacgtggtagagcgcaacgaaggccgcacgatcctc
gcgggctttccgtggttcacggactggggtcgcgacacattcatcgcaatgcgcggtttg
ctgatcgcatcaggccggctcgacgacgccgaagcgatcctgctcgaatggtcaggcacg
ctgtccgaaggcatgctgccgaatcgtttccccgactatggcgacacgccggaatacaat
tccgtcgacgcgtcgttgtggttcatcgtcgccgtgcacgactatctggcgacgcatcac
gcgagcgccgccacgcagcagcgcctgcagcaggcaagcgaagccatcctcaggggctac
acggaaggcacgcgcttcaacatccaggcatccgccgctgacggcctgctcagcgccggc
acacccggcgtgcaacttacgtggatggatgcgaaagtcggcgactgggtggtcacgccg
cgtatcggcaagccagtcgaagtgcaggcgctctggatcaacgcattgcgcattgcagca
agttggaatccgcactggcagccggccgctgaccgagcgttgcaagcgtttcatgaacgc
ttcatcgatccgtccacgcaagcactgttcgacaacgtggacgtcgatcatgtcaaaggc
gcgatagaccgctcgattcgccccaaccagatcttcgccctgggcggcctgccgtttccg
ttgctcgacggcgcggcggcgcgcgcggtgctcgaccaggtcgaagcgcagttgctcacg
ccactgggactgcggacgctggcgccttccgatcctgcctatcgcgggcactacggcggg
cagccgctggagcgtgacggcgcctatcatcaaggaaccgcgtggccgtggctgctcggt
ccgtttgtcgaagcatggttgcgagtccacggcggcgcggcggatgcccgcatgcaagcg
aaaacgcgctttctcgacccgctctacgcgcatctcgatcatgccggtctcgaccatctc
tctgaaatcgccgatggcgatgcgccgcacgcgcccgccggcacgcctttccaggcctgg
tcgctgggcgagttgttgcgcatggagatgctgctggcccggttgccgtccgccggcgcc
taa
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