Pyrodictium delaneyi: Pyrde_2021
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Entry
Pyrde_2021 CDS
T04114
Name
(GenBank) geranylgeranyl pyrophosphate synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl00900
Terpenoid backbone biosynthesis
pdl01100
Metabolic pathways
pdl01110
Biosynthesis of secondary metabolites
Module
pdl_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Pyrde_2021
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdl01006
]
Pyrde_2021
Enzymes [BR:
pdl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Pyrde_2021
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Pyrde_2021
2.5.1.29 geranylgeranyl diphosphate synthase
Pyrde_2021
Prenyltransferases [BR:
pdl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Pyrde_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Astro_VPg
Motif
Other DBs
NCBI-ProteinID:
ALL02064
UniProt:
A0A0P0N5Q9
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All DBs
Position
complement(2005539..2006543)
Genome browser
AA seq
334 aa
AA seq
DB search
MTQLSERLRSYITRVAGLVDGYIYARVHGEPEELYNAALHLIRAGGKRLRPVIVVATTEA
LGEEAEKALPFAAAVELVHNFTLVHDDIMDRDDFRRGVPTVHKLWGEPLAITAGDLLYAK
AFEALTDARDKGVPAERVAKAVRVLAQASSIVAEGQAMDMMFEEEEYVDVEDYLKMIYKK
TGALFEASAVLGGLVATSDENILSSLASYGKSLGIAFQIRDDILGIAGEESELGKPIYSD
IREGKKTLPILYALSKLEGDAREKLEKVLGNRDAGREELEEAAKLIKEAGGIEYAEELAR
RYVEQALAALKVLPENEYREMLEELARFAVSRTR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgactcagctctccgagaggctgcgcagctatataacaagagtagcagggctcgttgac
ggctacatttatgcacgtgtccatggcgagcccgaagagctatataatgctgcactccac
cttataagagctggtggtaagagactacgccctgtcattgttgtagctacaacagaagcc
ctaggagaggaagccgagaaggctctcccatttgcagcagctgtcgagctggttcacaac
ttcaccctagttcacgacgatataatggaccgtgacgattttcgtcgaggcgtgccgaca
gtgcacaagctatggggcgaacctctagctataacggctggtgacttgctctatgccaag
gcgtttgaggcgttaacagacgcacgtgacaagggtgtaccagctgagagagtagcaaaa
gctgtacgtgtgttagcacaagcgtcctctatcgtagccgaaggtcaggcaatggatatg
atgttcgaggaagaagagtatgtagacgtagaggattacctcaagatgatatataaaaag
acaggagccctcttcgaagcatctgcggtccttggcggcctcgtagctacaagtgacgag
aacatactatcgtcgcttgcaagctacggtaagagtcttggcatagcattccagatacgt
gacgacatactgggtattgcaggtgaagaaagtgagctaggtaagcccatctatagcgac
ataagagaggggaaaaagactctgccaatactgtacgctctaagcaagctcgagggtgat
gcgcgcgagaagcttgaaaaagtgcttggaaaccgcgatgcaggccgcgaagaacttgaa
gaggcagccaagctcataaaggaggctggtggcatagagtatgctgaggagctggcacgc
cggtatgtcgaacaagccctagcagcgttaaaggtgcttccggagaacgagtacagggaa
atgcttgaagagcttgcgagatttgcggtatcccgtacgaggtag
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