Pediococcus damnosus: ADU72_2003
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Entry
ADU72_2003 CDS
T04321
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdm
Pediococcus damnosus
Pathway
pdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ADU72_2003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdm03400
]
ADU72_2003
Enzymes [BR:
pdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADU72_2003
DNA repair and recombination proteins [BR:
pdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ADU72_2003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
PriA_C
DEAD
PriA_CRR
Helicase_C
PIF1
AAA_30
DAP3
AAA_19
zinc-ribbons_6
SLFN-g3_helicase
T2SSE
UvrD-helicase
NACHT
DUF763
AAA_16
Raptor_N
Motif
Other DBs
NCBI-ProteinID:
AMV67924
UniProt:
A0A143B1X8
LinkDB
All DBs
Position
1989349..1991763
Genome browser
AA seq
804 aa
AA seq
DB search
MVQIAKVIVDVPTMQTNNPYSYLIPTQIENDIQVGMRVVVPFGNGNRKIQGFVVALETKA
EEKNPLKSIESLMDLEPVLNPELIKMSSWLADSTFSFQITCLLTMLPNVMRAKYTKQLKI
IDSQVSIEDLATILPESDWDDFQPDQLTSKQQSDLLKLRKKNQIEIIYKVKNQAHSKQVF
QIKSQINSENESKILNSLRKNATKIRDLVHYLAAHPNEIKQTEVEKKLKITAATIKSAEE
RGWLIRKKVEQYRDPYATNAKLTLPLKLNSEQQSALDQVTDSIKKQQARTFLLEGVTGSG
KTEVYLQAIAYALAQNKTAIMLVPEIALTPQMVSRVKGRFGKQVAVLHSGLSDGEKYDEW
RRIKRHEAQVVVGARSAIFAPIENVGVIIIDEEHETSYKQDDTPRYHARNVAQWRSDYHN
CPLVLGSATPSLESRARSERHVYQLLRLPDRINGHPLPEVKIIDMREELQSGSNQNFSDP
LLAAIKDRLNLKQQSILMLNRRGYSSFIMCRDCGFVLKCPNCDISLTLHMDSRRMKCHYC
GHEEPIPKQCPNCHSEKIRYYGTGTEKVEKELQAQFPEARILRMDVDTTRRKGSHERILQ
KFGRQQADILLGTQMIAKGLDFPNVTLVGVLNADTALELPDFRSSERTFQLLTQVSGRAG
RADKLGEVFIQTFNPDHYAIQLAKTQNYENFFRKEMYIRHQEKYPPYYFTLQITAAHKEE
KVAAQKMYTVLDELKPALSSNAIVLGPTPKPIARVKNKYYYQIVIKYKKEPRLHEAVTKI
LQESQADYRLGIQLSIDPEPQSFM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaattgccaaagtaattgttgacgtgcccactatgcaaacaaataatccctat
tcgtatttgattccaacccagattgaaaatgacatccaagttggaatgcgtgtggttgtg
ccatttggtaacggtaatcgaaaaattcagggatttgttgttgcacttgaaactaaagct
gaagaaaagaatcctctcaaaagtattgaaagtttaatggatttggaaccagttttaaat
ccagagcttattaaaatgtctagttggttagcggatagtactttttcctttcaaatcacc
tgtcttctaacgatgttgccaaatgttatgcgggcaaaatatactaagcagttgaaaatc
atcgattctcaagtttcaattgaagatttagcgactatcttgcctgaatctgattgggat
gatttccaaccggatcaattaacttcaaaacagcaaagtgatttattgaaactacgaaaa
aagaatcaaattgaaattatttataaagttaaaaaccaagcacattctaagcaagtattt
caaattaagtcacaaataaattctgaaaacgaatctaaaattttgaactcccttcgaaaa
aatgcaaccaaaattcgtgacctcgttcactatttagcggcgcatccgaatgaaattaaa
caaactgaagttgaaaaaaaattaaagattacggctgccacgattaagagtgccgaagaa
cgtgggtggcttatccgtaaaaaagtcgaacaataccgggatccttatgcaacaaacgcg
aaattgactttaccactgaaactgaattcagagcaacaaagtgcattggatcaagtaact
gacagtataaaaaagcagcaggcacgaacctttttattagaaggggttactggaagtgga
aaaacagaggtctatttgcaagcaattgcctatgcattagcacaaaataaaacggctatt
atgctggtgccagaaattgccttaacgccccaaatggttagtcgggttaaaggccggttt
gggaaacaagtggctgttttacacagtggcctttcggatggcgagaaatacgatgaatgg
cgaagaattaaacgacatgaagctcaagtagtggttggcgctcgatcagcgatttttgca
ccgattgaaaatgtgggtgtcattattattgatgaggaacatgaaaccagttataagcaa
gatgatacgcctcgttatcatgccagaaatgtggcgcaatggcggagtgactatcataat
tgtcccttggtgctgggcagcgcaactccttcactggagtctagagcgcgtagtgaacgg
catgtttatcaattgcttcgattaccggaccgaattaatggtcatccgttgccagaagtg
aaaattatcgatatgcgggaagaattacagagtggttcgaatcaaaatttctcggatccg
ttgttggcggccattaaggatcgtctgaatttaaaacaacaaagtattttaatgctaaat
cggcggggttattcttcatttatcatgtgtcgggattgtgggtttgttttaaaatgccca
aattgtgatatttcattaactttgcatatggacagtcgccgaatgaaatgtcactattgt
ggtcatgaggagccaattcctaagcagtgtccaaattgtcacagtgagaaaatccgttat
tatggaacggggactgaaaaggttgaaaaagaacttcaggctcaatttccagaagcccga
attttaagaatggatgttgatacgacgagacggaaaggctcccatgaacgaattttacaa
aagtttggccgtcaacaggctgatatcttattaggaacccaaatgattgctaagggctta
gactttcccaatgtgaccttagttggagttttgaatgcagatacagctttggaattacca
gatttcagatcgagtgaacgaacttttcagcttttaactcaggttagtggtcgcgcaggg
cgagctgacaaacttggtgaggtatttatccaaacatttaatccagatcattatgcgatt
caacttgccaagacccaaaattatgaaaactttttccgaaaagaaatgtatattcgccat
caagaaaaatatccgccatattattttacacttcaaattactgcagctcataaggaagaa
aaagttgcggctcaaaagatgtatactgttttagatgagcttaaaccagcactaagttcg
aatgcaattgtcctcggaccaactccgaaaccaattgcgcgggttaaaaataaatattat
tatcaaattgtgattaaatataaaaaagaaccccgtttacacgaggcggtcacaaaaatt
ttacaggagtctcaggctgactatcggttaggaattcagctttccattgatccagaacca
caatcgtttatgtag
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