Prevotella denticola: HMPREF9137_1700
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Entry
HMPREF9137_1700 CDS
T01459
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pdn
Prevotella denticola
Pathway
pdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9137_1700 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdn01007
]
HMPREF9137_1700 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdn03016
]
HMPREF9137_1700 (lysS)
Enzymes [BR:
pdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HMPREF9137_1700 (lysS)
Amino acid related enzymes [BR:
pdn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF9137_1700 (lysS)
Transfer RNA biogenesis [BR:
pdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF9137_1700 (lysS)
Prokaryotic type
Other AARSs
HMPREF9137_1700 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF4332
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEA22039
LinkDB
All DBs
Position
complement(1952807..1954543)
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AA seq
578 aa
AA seq
DB search
MNVLELSEQEIGRRQSLQELRAMGINPYPAAEFPTNAYSTDIKAQFKEGEQREVVIAGRM
MGRRVMGKASFAEIQDSKGRIQVYITRDDICPGEDKDLYNKVFKKLLDIGDFIGIKGFVF
KTQMGEISVHAKEITLLSKSLKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNDGVKD
TFLKRATVLRTMRRFFDEAGYTEVETPTLQSIPGGASARPFITHFNALNIDMYMRIATEL
YLKRLIVGGFEGVYEIGKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKIC
TEVNGKPEVQMGDKTISFKAPFRRLPILDAIKEKTGFDLAGKSEEEIRHIAVDELKLEGI
DESFGKGKLIDEIFGEFCEGTFIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKE
LANAYSELNDPIDQEERFLDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRL
VMLMTGKEYIQEVLLFPQMKPEPKIPQSSVKEWAELGVAESWVYVLRKAGFNLISDIKDE
KAQGLQQKLGEINKKYKLGYEKPSVDEIQQWIERAKEK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttagaattatctgagcaggaaatcggccgtcgccagagcctgcaggaattg
cgtgcgatgggcatcaatccctatccggcagcagagttccccaccaatgcttactctact
gacatcaaggcgcagtttaaggagggcgagcagcgtgaggtcgtcatcgccggccgtatg
atggggcgccgtgtcatgggcaaggcctccttcgcagagatacaggacagcaagggcaga
atccaggtttacatcactcgtgacgacatttgtccgggtgaggataaagacttatataac
aaggtgttcaagaagctgctcgacatcggcgacttcatcggtatcaagggtttcgtcttc
aagacacagatgggcgagatttctgttcatgccaaggaaatcacgctgctgtcgaagagt
ctgaagccgctgccggtcgtcaagtacaaggacggcgaggcatacgacaagtttgaagat
cccgagcagcgttaccgccagcgttatgtagatctcgtcgtaaacgacggcgtgaaggat
actttcctcaagcgcgccaccgtcctgcgcacgatgcgccgcttcttcgacgaggcggga
tatacggaggtggagacaccgacgttgcagagcattcccggcggtgcgagcgctcgtccg
ttcatcacccatttcaatgcgctcaacatcgatatgtatatgcgtatcgccacggagctt
tacctgaagcggctgattgtcggaggatttgaaggtgtctatgaaatcggaaagaacttc
cgcaacgagggtatggaccgcttccacaacccggagttcacctgcatggaactttatgtg
cagtacaaggactacaactggatgatgtcgttcaccgagcagctgctggagaagatttgc
acggaagtgaacggaaaaccggaggtgcagatgggtgacaagaccatcagtttcaaggct
cctttccgccggctgcctatcctcgacgccatcaaggagaagacgggcttcgatctcgcc
ggcaagtcagaggaggaaatccgccatatcgccgtggacgaactgaagctggaaggcatt
gacgagagcttcggcaaggggaaactgattgacgaaatcttcggcgagttctgtgagggg
acgttcatccagccgaccttcatcaccgattatcctgtcgagatgtcgccgctgacgaag
atgcaccgctccaagccggggctgacagagcgtttcgagctgatggtaaacggcaaggaa
ctggcgaatgcttattccgagctgaacgacccgatcgatcaggaagagcgtttcctcgac
cagatgcacctggccgacaagggagacgacgaggcgatgatcatcgaccaggatttcctc
cgtgcgctgcagtatggtatgccgccgacctctggtatcggcatcggtatcgaccgtctg
gtaatgctgatgaccggtaaggagtacatccaggaggtattgctcttcccgcagatgaag
ccggaaccgaagattccgcagtcatctgtcaaggaatgggcagagcttggcgtggcagaa
tcctgggtgtatgtgctgcgcaaggccggcttcaacctcatctccgacatcaaggacgag
aaggcacagggtctgcaacagaaactcggtgaaatcaacaagaagtacaagctcgggtac
gagaagccttctgttgacgagattcagcagtggattgaaagagcaaaagaaaagtaa
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