Polynucleobacter duraquae: CL55_00008320
Help
Entry
CL55_00008320 CDS
T04207
Name
(GenBank) Site-specific recombinase XerD
Organism
pdq
Polynucleobacter duraquae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF5753
Motif
Other DBs
NCBI-ProteinID:
AKD25165
UniProt:
A0A0E3ZLX2
LinkDB
All DBs
Position
complement(816864..817907)
Genome browser
AA seq
347 aa
AA seq
DB search
MASITQRSGSYRVRIFRKNDKPISKSFSSEPEATQWLKKTQAQLELGLYQEEVKNQVTVK
VGFSEAVEKYIPAHSVHKGNHKTEAGILRILASRWEGRSLSTISKQDIVLLKDDLLAKGR
AASTVNHYLNALSQLYQIAINEWGLNVTNPITGIKRMSEPQGRMKRLSIEAEATLLVCCH
ELSLDYLADIIVVAIETGMRCGEILSMRWEDVDFINRRVLLRDTKNGDSRQVPLSFRVKT
ILEQLSSRDTGDLVFPYCRWAIRRHYIRVVKQSAKAHKGVQNPFTDLRFHDLRHEALSRL
SDKGLNVMEIAHVSGHRTLAMLRRYTHPCHETLLGKLDKELNIKLAG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattacacaacgcagtggctcttacagagtgcgaatctttcgcaagaacgac
aaacccatcagcaaatcctttagtagtgaaccagaagcaactcagtggcttaaaaagacg
caggcacagcttgaactgggtctctatcaggaagaagttaaaaatcaggtcacggtaaag
gtagggtttagtgaagcagtagaaaaatatatccctgctcattcggttcataagggtaat
cacaagacagaagctggaatactgagaattctcgccagtcgctgggaaggtcgaagcctt
agtactattagtaaacaagacattgttttactcaaagacgacctcttagccaagggtcga
gcagcctcaacagtcaatcactatctaaacgccctatcccagctttatcagatagccatt
aatgaatggggactaaatgttactaatcccatcacaggcattaagaggatgtctgaacca
caaggacgaatgaaaaggctttcaatagaagcggaagccaccctgctcgtctgctgtcat
gagctgagcttagactatcttgctgacattattgtggtcgctatagagactggaatgcgg
tgcggtgaaattctgtcgatgcgatgggaagatgtggattttatcaatcgcagagtttta
cttagagacaccaagaatggagattcgagacaagtaccactatcgtttcgagtgaaaaca
atcctagagcaactttccagcagagatactggcgacctagtatttccatattgtcgctgg
gcaatcagaagacattacataagagtagttaagcaatcagcaaaagctcacaagggagtg
cagaatccatttactgatttacgctttcatgacctaagacacgaagctctgagtaggcta
tctgacaaaggcttaaatgtgatggaaatcgctcatgttagcggacaccgaaccctagca
atgctcagacgctacacacatccttgccatgaaactttattgggtaaattggataaggaa
ttaaatattaaattagcgggctag
DBGET
integrated database retrieval system
