Polynucleobacter duraquae: CL55_00020110
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Entry
CL55_00020110 CDS
T04207
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdq03032
]
CL55_00020110
03036 Chromosome and associated proteins [BR:
pdq03036
]
CL55_00020110
03400 DNA repair and recombination proteins [BR:
pdq03400
]
CL55_00020110
DNA replication proteins [BR:
pdq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CL55_00020110
Chromosome and associated proteins [BR:
pdq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CL55_00020110
DNA repair and recombination proteins [BR:
pdq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CL55_00020110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Urease_beta
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKD26344
UniProt:
A0A0E3V1P9
LinkDB
All DBs
Position
complement(1979879..1980163)
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AA seq
94 aa
AA seq
DB search
MNKAELIAAIADDAEISKAKAEFALNSAIEQIIKAVTKGDSVQLIGFGTFSSGKRAARMG
RNPKTGEPLKIAAAKTVKFSAGKAFKDSVNKRKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaagcagaactaatcgcagcgattgctgacgacgctgagatctcaaaagccaaa
gctgaatttgcattgaattctgctattgagcaaatcattaaagctgttactaaaggcgac
tcagtacagctgatcggttttggtactttctcttctggtaagcgcgctgcacgtatgggt
cgtaacccaaaaactggtgagccactcaaaattgctgctgctaaaactgttaagttttct
gctggtaaagcatttaaagattcagttaacaagcgtaagaagtaa
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