Photobacterium damselae subsp. damselae: CAY62_10180
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Entry
CAY62_10180 CDS
T04927
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pds03009
]
CAY62_10180
Ribosome biogenesis [BR:
pds03009
]
Prokaryotic type
ribosomal protein modification factors
CAY62_10180
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
UPF0728
Motif
Other DBs
NCBI-ProteinID:
ARR49899
UniProt:
A0A1X9U2W3
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All DBs
Position
I:2228069..2229817
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AA seq
582 aa
AA seq
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MKTFIPGKDAALEESIERFQTQLKSLGFNIEEASWLNPVPNVWSVHIRDVDAPMNFTNGK
GATKKAALASALGEYFERLSTNYFYADYYLGQDIANSEFVHYPNEKWFPIDFEENLPPEG
ILDERLTQFYDPTMELLGTDLVDLQSGNMERGVCCLPFERQSDNETVYIPMNIIGNLYVS
NGMSAGNTKMETRVQGMSEIFERAIKNRIIAERISLPEIPAEVIAQYPSIKESIDCLEAE
GFPIFCFDASLGGQYPVICVVLMNQDNNTCFASFGAHPSFEVSFERTVTELLQGRSLKDL
DVFPEPSFDDDEVGDHHNLETHFIDSSGLISWDLFKQEADFEFVHWDFSGTTEQEFTRLL
GMFHQEGTDVYISDYNHLGVDCCRIIVPGWSEIYPVEELIEANNNVAMELRETILALPSV
EWDSEQYAEMYSILEEEGFDDFNRLYEIIGLVPDAGSAWQTLRIGELKCLLALAGGDLEL
ALEHASWCVDYNVSTYSKERARFFRCLVASLKLALDEERDPAQYKHAFERQFGTDTVAAA
WSSIEGTVRFYGLTAGDLSMSQFSAHQKLLASYQKLQAAKKN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatttattccaggtaaagatgcagccttagaagagtcgattgagcgtttccaa
actcaactgaaaagtctaggctttaatattgaagaagcttcatggttaaatccggttcca
aacgtatggtcggtacatattcgtgatgttgatgctccaatgaatttcaccaacggtaag
ggcgcaacaaaaaaagcggctttagcttctgcgctaggtgaatattttgagcgtctatca
actaactacttttatgctgactactacttaggtcaggatattgcgaacagtgaatttgtt
cactatccaaacgaaaaatggttcccaattgattttgaagagaatctaccaccagaaggg
attttggatgagcgcttaactcagttctacgatcctaccatggagctattaggcacagat
ctggttgatcttcagtctggcaatatggaacgtggtgtttgttgccttccgtttgagcgc
caaagtgataatgaaaccgtttatattccaatgaacattatcggtaacttgtatgtttca
aatggtatgtctgcgggtaacaccaaaatggaaactcgcgttcaaggcatgtcagaaatt
tttgagcgtgctataaagaatcgcattattgctgaacgcattagtttgccagagatcccg
gcagaagtcattgctcagtacccaagcattaaagagtctatcgactgtctagaagccgaa
ggtttccccatcttctgttttgatgcatctcttgggggccagtacccagtgatctgtgtg
gtattgatgaaccaagataacaatacctgttttgcttcatttggtgctcacccaagcttt
gaggtttctttcgaacgtaccgtaactgaattgttacaaggccgtagtttaaaagatctg
gatgtttttccagaaccttcttttgatgatgatgaagtgggtgatcatcataacctagaa
acgcattttattgattcttcaggtttgatctcttgggatctgtttaagcaagaagctgac
tttgagtttgttcactgggatttttccggcacaacagaacaagagtttactcgtctactt
ggtatgttccatcaagaaggtaccgatgtttatatttctgactataaccatttaggtgtt
gattgctgtcgtatcatcgtacctggctggtctgaaatttatccagtagaagagttaatt
gaagctaataacaatgtggcaatggagcttcgtgagaccatccttgctcttcctagcgtt
gagtgggacagtgaacaatatgctgagatgtactctatcttagaagaagaaggctttgat
gatttcaaccgtttatatgaaatcattggtctggttcctgacgcaggttcggcatggcaa
acattgcgtattggtgaactaaaatgtctactcgcactagccggtggcgatcttgaatta
gcactagagcacgcgagttggtgtgttgactataacgtttcaacttatagcaaagagcgt
gctcgtttcttccgctgcttagtggcaagcttaaaattagccctagatgaagaacgagat
cctgcgcaatataagcacgcgtttgaacgtcaatttggtacagataccgtagcagcagca
tggagctcgattgaaggtacagttcgtttctacggtttaaccgcaggcgatctatctatg
agtcaattctctgcacaccaaaagctattagcttcttaccagaagctacaagccgctaag
aaaaactaa
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