Photobacterium damselae subsp. damselae: CAY62_14780
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Entry
CAY62_14780 CDS
T04927
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00300
Lysine biosynthesis
pds00470
D-Amino acid metabolism
pds01100
Metabolic pathways
pds01110
Biosynthesis of secondary metabolites
pds01120
Microbial metabolism in diverse environments
pds01230
Biosynthesis of amino acids
Module
pds_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAY62_14780
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAY62_14780
Enzymes [BR:
pds01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CAY62_14780
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ARR50638
UniProt:
A0A1X9U4V3
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All DBs
Position
I:3127073..3128326
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AA seq
417 aa
AA seq
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MDYFNYQQDGQLWAEQVSAQSLAAQYGTPLYVYSRATLERHWQAFDRAVASHPHLICYAV
KANSNLAVLNVLAKLGSGFDIVSLGELERVIAAGGDPSKVVFSGVGKSVAEMTRALSLGI
KCFNVESEPELERLNQVAAELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGITFERAL
DVYRLAHRLPNLNVVGMDCHIGSQLTEITPFIDAVDRLLSLIDTLADEGITIAHLDVGGG
LGVTYDQEQPPEPSDYAIALLERLNQYPELELIFEPGRAIAANAGILLTRVEYLKHTEYK
NFAIVDAAMNDLIRPTLYSAWQAIIPVSPRQSEMQTYDIVGPICETGDFIGRDRQLALEP
NDLLAVRSAGAYGFVMASNYNTRARAAEVMVDGEQSYLVRQRETLQQLWQGESLLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttaattatcagcaagatggccaattgtgggccgagcaagtttcggcacaa
tcattggctgcgcagtacggtaccccgctttatgtttactctcgcgcaacgttagagcgt
cattggcaggcgttcgatcgtgccgttgcttctcaccctcatttaatctgctatgcggta
aaagccaattcaaatttggcggtcttaaatgtgttggcaaaactgggttcgggctttgat
atcgtttcgttaggggagcttgagcgtgtaattgccgcaggtggtgacccaagtaaagtg
gtgttttctggtgtgggtaaatcggtggcagagatgacgcgcgctttatctcttgggata
aaatgtttcaatgtggaatctgagccagaacttgaacgattaaatcaggtggcggcagag
ctaggtgtgattgcgcctatttcactacgtattaatccagatgtggatgcgaaaactcac
ccttatatttcaaccggtctacgtgataataaattcggtatcacttttgagcgagcatta
gatgtatatcgcttagcccaccgtttgccaaaccttaatgtggtggggatggattgtcat
attggttcgcaacttaccgaaattaccccatttattgatgccgttgatcgcctgctaagc
ttaatagataccttagccgatgaaggtattactatcgctcatcttgatgttggtggcgga
ctcggggtgacttatgatcaagaacaacctcccgagccatcagattatgctatcgcgtta
ttggaacgtttaaaccagtatccagaattggagctgatttttgagcctggtcgtgccatt
gccgctaatgccggtattttgctaactcgggttgagtatctaaaacatacggaatataag
aactttgccattgttgatgccgcgatgaatgatctgattcgtccgacactttattcagct
tggcaggccatcattccagtctctcctcgtcaaagtgagatgcagacttacgatattgtt
gggccaatttgtgaaacgggtgactttatcggtcgagatcgtcaacttgcgctggagccc
aatgatcttttagcggtgcgctcagctggagcttatggctttgttatggcctcaaactac
aatactcgcgcccgtgccgcagaagtcatggtcgatggtgagcagagttatttagtccgt
caacgtgaaacactacaacagttgtggcagggtgaaagcctgctaccagaataa
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