Paenibacillus durus: PDUR_00405
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Entry
PDUR_00405 CDS
T03297
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00550
Peptidoglycan biosynthesis
pdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDUR_00405
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdu01002
]
PDUR_00405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
PDUR_00405
Enzymes [BR:
pdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PDUR_00405
Peptidases and inhibitors [BR:
pdu01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PDUR_00405
Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PDUR_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AIQ10667
UniProt:
A0A089HHT1
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All DBs
Position
86224..87615
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AA seq
463 aa
AA seq
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MKFKRKSSVKQMAVKTVTAGLLLNMLVLSPIPAMAESVQTPAPAGASTATATPATSGTAV
TIPSIQSLGLNLKSAVLLEPTTGKVLLSLNADQPLPPASMTKMMTEYLIADAVKNGKLSW
DQKVTVAENAAEQIGSRIFLAVGDQHTIEELYIAMAVGSANDATVALAETLSGSEQEFVK
LMNETARKMGMKTAYFINSTGLSRDDMPAKYRPDTDKETVMSAMDAAILAQHIVTDHPDF
SKYTTIQSYKFRERDAAPMINYNWMLEANKNIANFKAYAYPGLDGLKTGHTSSAGNCFTG
TAVRDGMRLISVVMGANSEAHRFTETRKVLDFGFNNFEVKQVVSAKATVAGNETVPVEKG
KKSEVPVVTDAGATFVVPKGTASPQITTAVQINDPSTLVAPIAQGTKVGKVTYTYKVNGL
NPQQKTVNLITSEEAEKAGWFKLLFRAIGNFFRDIFSGIKNLF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttcaagcgtaaatccagtgtgaaacagatggcagtgaagacagtaacagcgggt
ttgcttttaaatatgcttgtgttatctccaattccggcgatggccgaaagtgtgcagaca
ccggctcctgcaggggcgagtacagccacggcgacgcctgccacatcgggaacggcagta
accattccttctatccaatcgctcggtttgaatctgaaatcggctgtattgcttgagcct
accactgggaaggtgctgttgtccctgaatgccgatcagccgcttcctccggccagtatg
acgaaaatgatgacggaatatctgatcgccgatgcggtcaagaatggcaagctgtcctgg
gatcagaaagtgaccgttgccgaaaatgccgccgagcagattggctcgcgcatttttttg
gccgtgggagatcaacataccattgaagaactgtacatagccatggctgttggctcagcg
aatgatgccacggttgccctggctgaaactctctccgggtcggaacaggaattcgttaaa
ttaatgaatgagacggcccggaagatggggatgaagaccgcctattttatcaactccacg
ggacttagccgagatgacatgccggccaaataccgtccggatacggataaagaaacggta
atgtcggcgatggatgcagcgattctcgcccagcatatcgttacagatcatccggatttc
tcgaagtatacgaccattcaatcctataagttccgcgaacgtgatgcagcgccaatgata
aactacaactggatgctcgaagcgaataagaatatcgccaacttcaaagcttatgcttat
ccgggcctcgacgggttgaagacgggacatacctctagtgcgggcaactgctttacgggt
actgccgtacgggacggcatgcgtctgatcagcgtggtcatgggtgcgaactccgaagcc
caccgctttacggagacgaggaaggtgcttgatttcggatttaacaattttgaagtcaag
caggtggtttcagccaaggcgactgttgccggcaatgaaacggttccggttgagaagggc
aagaagagtgaagtgccggtggtgactgacgcaggcgctacgttcgtcgttcccaaggga
acagcctctccgcagattacgacagcggtacagatcaatgacccgtcgacgttggttgcg
ccaatcgcccaaggtacgaaggtggggaaagtaacctatacttataaagttaacggctta
aacccccagcaaaaaacggtcaatctgattacatccgaggaagcggagaaagccggatgg
ttcaaactgctcttcagggcaattggaaacttttttagggatattttttcgggaattaaa
aatttattctaa
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