Phytobacter diazotrophicus: HHA33_20365
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Entry
HHA33_20365 CDS
T06586
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdz03016
]
HHA33_20365 (miaB)
Enzymes [BR:
pdz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HHA33_20365 (miaB)
Transfer RNA biogenesis [BR:
pdz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HHA33_20365 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QJF18752
LinkDB
All DBs
Position
4269028..4270452
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AA seq
474 aa
AA seq
DB search
MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTEVAEEADVLLLNTCSIREKAQEKVF
HQLGRWKLLKEKNPDLIIGVGGCVASQEGDHIRQRAHYVDIIFGPQTLHRLPEMINSVRG
NRSPVVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPCDD
ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSH
PIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDI
QISSDFIVGFPGETTQDFEQTMKLIDDVNFDMSYSFIFSARPGTPAADMVDDVPEEDKKQ
RLYILQERINQQAMAWSRRMIGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGRPEMIG
KFVDVEITDVWTNSLRGKVVRTEDEMGLRIAQSPESVIARTRKENDIGVGLYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaactccacatcaaaacctggggctgtcagatgaacgagtacgattcatcg
aagatggccgatctgctggatgccactcacgggtatcaactcaccgaagtggccgaagaa
gcagatgtgctgctgcttaatacctgctcaatccgcgagaaggcgcaagagaaagtcttc
caccagttggggcgctggaaattattaaaggaaaaaaatccagacctgatcattggtgtc
ggcggttgcgtcgcatctcaggaaggcgaccatattcgccagcgtgcccactatgttgac
attatttttggaccgcaaacgctgcaccgtctgccggaaatgatcaactccgtgcgcggc
aatcgcagcccggtggtggatatcagcttcccggaaatcgaaaaattcgaccgcctgccg
gaaccgaaagccgaaggtccgaccgcctttgtctccatcatggaaggctgcaataagtac
tgcacttactgtgtcgtgccctacacccgtggcgaagaggtgagccgtccgtgtgacgat
atcctgtttgaaatcgcgcaactagcggcacaaggcgtacgtgaagttaacctgctgggc
caaaacgtcaacgcctggcgcggtgagaattacgacggaagcaccggttccttcgccgat
ctgctgcgtctggtggcggcgattgacggtattgaccgtattcgttttaccaccagccac
ccgatcgaattcaccgacgatattattgatgtctaccgcgatacgccggagctggtgagt
ttcctgcatctgccggtacaaagtggttctgaccgcgtactgaacctgatgggccgtacc
cataccgcgctggaatacaaagcgatcatccgcaaactgcgtgccgcacgtccggacatt
cagatcagctctgactttatcgttggcttccctggcgaaacgacccaggacttcgagcag
accatgaagctgattgacgatgtgaatttcgatatgagttacagctttattttctccgcc
cgtccgggaacgcctgcggccgatatggtagatgacgtaccggaagaggataaaaagcag
cgcctgtatattctgcaggaacgtatcaaccagcaggcaatggcctggagccgccggatg
atcggcacgactcagcgcatcctggtggaaggaacgtcccgtaagagcatcatggagctg
tcaggccgtaccgaaaataaccgcgtggtgaacttcgaaggcagaccggagatgatcggg
aaattcgttgacgtggaaatcaccgacgtctggacaaactccctgcgcggtaaagtggtg
cgtaccgaagacgaaatgggcctgcgcatagcgcagtcgccagaatcggtcatcgcccgt
acccgtaaagagaatgatatcggcgttggtctctaccagccttaa
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