Pectobacterium parmentieri SCC3193: W5S_3346
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Entry
W5S_3346 CDS
T02514
Name
(GenBank) Lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00540
Lipopolysaccharide biosynthesis
pec01100
Metabolic pathways
Module
pec_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
W5S_3346
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_3346
Enzymes [BR:
pec01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
W5S_3346
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Lipid A
W5S_3346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
AFI91420
UniProt:
A0A0H3I623
LinkDB
All DBs
Position
complement(3620448..3621599)
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AA seq
383 aa
AA seq
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MSSRPLTIGLVAGETSGDILGAGLIRALKEKVPNARFVGVAGPRMQAEGCEAWYEMEELA
VMGIVEVLGRLPRLLKIRRDLTQRFSELQPDVFVGIDAPDFNITLEGNLRQRGINTIHYV
SPSVWAWRQKRVFKIGKATNLVLAFLPFEKAFYDRFNVPCRFIGHTMADAMPLHPDKLAA
RAMLGIAPDVHCLALLPGSRGAEVEMLSADFLNTAVLLRQHFPDLEIVVPLVNSKRREQF
ERIKNSVAPDLRVHLLDGQAREAMIASDAALLASGTAALECMLAKCPMVVGYRMKPFTFW
LAQRLVKTPWVSLPNLLAGRELVTELLQTDCTPDKLAAALLPLFAETDKMAELRTTFVDL
HQQIRCNADEQAAQAVLELVNPC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgtcctttgactattgggctagtcgccggagaaacttccggcgacatcctg
ggcgcaggtctgatccgggcgctaaaagaaaaggtaccgaatgcgcggtttgtcggcgta
gccgggccgcgtatgcaggctgaaggctgtgaagcctggtacgaaatggaagagctggcc
gtcatgggcattgttgaagtgctcggacgccttcctcgtctgctgaaaattcggcgagat
ttaacccaacgttttagcgaacttcagcctgatgtcttcgtgggcattgatgcacctgat
tttaatatcacgctggagggtaacctcaggcagcgtggtatcaataccattcattatgtc
agcccgtccgtgtgggcatggcgtcaaaaacgcgttttcaaaataggtaaagcgactaat
ctggtgctggccttcttgccttttgaaaaagcgttttacgatcgtttcaatgtaccttgt
cgctttatcggccatacgatggctgatgcaatgccgctgcatcccgataagctggcagca
cgcgcgatgctgggtattgcgcccgatgtgcattgtctggcactgctgccgggcagtcgt
ggtgccgaagttgaaatgcttagcgcggatttcctcaatactgccgtgctattacgccag
cattttcccgatctggaaatcgtggttccgttggtgaacagcaaacggcgtgaacagttc
gagcggataaaaaatagtgtggcccccgacctgcgtgtacatctgctggatgggcaggcg
cgtgaagccatgattgccagcgatgcggcactgttggcatccggcacggcggcgttggag
tgtatgctggcgaaatgcccgatggttgtgggttaccgcatgaagccttttaccttctgg
ttggcacagcgtttggtcaaaacaccgtgggtgtcgctgccgaatttgctggctgggcgt
gagctggtgacggagttgctacagactgattgtacgccggataagctcgctgctgcgctg
ctgccgctgtttgccgagacggataaaatggctgaattacgcacaacgtttgtggatttg
catcagcagatccgctgtaacgccgatgagcaagcggctcaggcggtactggaattagta
aatccttgttaa
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