Peptoniphilus sp. ING2-D1G: ING2D1G_1562
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Entry
ING2D1G_1562 CDS
T03807
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ped
Peptoniphilus sp. ING2-D1G
Pathway
ped02020
Two-component system
ped02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ING2D1G_1562
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ING2D1G_1562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ped03021
]
ING2D1G_1562
Transcription machinery [BR:
ped03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ING2D1G_1562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
MarR_2
Sigma70_r4
Sigma54_AID
HTH_38
RepL
HTH_24
HTH_Crp_2
HTH_19
CENP-B_N
HTH_IclR
MarR
HTH_3
HTH_23
Sigma70_r4_2
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_17
HTH_10
HTH_11
HTH_26
HTH_5
HTH_28
Xre-like-HTH
LacI
Trp_repressor
HTH_31
TrmB
KORA
Fe_dep_repress
DUF2774
GerE
HTH_29
HTH_12
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CDZ75699
UniProt:
A0A090JQD3
LinkDB
All DBs
Position
I:complement(1552630..1553946)
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AA seq
438 aa
AA seq
DB search
MCLLILYTIFIVIYLEQMTKLNVNLNVSQKLNITADLLTSIDIMEMNFDELNEFLLKESQ
SNVMMDYENIGMNSDKDNWDLIENIYQDKDLRDHLYEQVMMLDLQEEKFGILYFLIDNLD
ERGFLSLSAEEISKSTGVKPKIVTECIEILKNFDPKGIGSANMIEALLFQIDKDENLELI
IKNHLKDIYEGKFNKIAKKLGISAEEVFEISQKLKKLNPIPALGFGRIEDVLYIRPEIFL
SEEDFKPQILDNSLNVGINSYYLRMMKEGCDKDTIDYLKKGYNRAQFIISSIERRKRNLE
LTVGEIVKRQGEFFFFGGVLRPMTQAEIARELGVSASTISRIVKNKYLSCSLGVFELKYF
FNRRPKSNKNISSDFIKKQIKGIIEKEDRKKPLSDEKIRKKLQNRGIDIKRRTIAKYREE
TRIPKSTTRRLMYEEENK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttattgatactttatactatttttattgtgatatacttagaacaaatgactaaa
ttaaatgtaaatttaaatgtttcgcaaaaattaaatataacggcggatttattgacctct
atagatattatggagatgaatttcgatgaattaaatgagttcttgcttaaagaaagtcaa
tccaatgtcatgatggactatgaaaacatagggatgaactcagataaagacaactgggat
ttaatagagaatatatatcaagacaaagatttaagagatcatctctatgaacaggtcatg
atgttggatttgcaggaagagaaatttgggattttatatttcctcatagataatttggac
gaaaggggatttttaagcttaagcgcagaagagatttccaaatcaaccggtgtaaaaccg
aaaattgtaacagaatgcattgaaatattgaaaaattttgatcctaaggggattggatct
gcaaatatgatagaagcgctgctttttcagatagataaagatgaaaatttggaacttata
attaaaaaccaccttaaagatatttatgaaggaaagtttaataaaatagcaaaaaaactt
ggaataagcgcagaagaagtatttgaaatttcccaaaagttaaaaaaactaaatcctata
cccgccttgggctttggaagaatagaagatgtgttatacataagacctgaaattttttta
tcggaagaagattttaaacctcaaattcttgataacagcttaaatgtcggcataaacagt
tattatttgaggatgatgaaggaaggctgtgacaaagacacgattgattatttgaaaaag
ggatacaatagagctcagttcataataagttccattgaaagaagaaaaagaaaccttgaa
cttactgtgggtgaaattgtgaagagacaaggagaatttttctttttcggaggtgtttta
aggcccatgacccaagcggaaattgcaagggagctgggagtttcagcctcaaccatttcc
aggatagtcaaaaacaaatacttgtcttgttccttaggtgtttttgaacttaagtatttt
tttaatagaagacctaaatcaaataaaaatatctcctcggattttataaaaaaacaaata
aaaggcataatagaaaaggaagacagaaaaaaacccttgtccgatgaaaagataaggaaa
aaactgcagaatagaggaatagatataaaaagacgaaccatagccaagtacagagaagaa
acgagaatacccaaatccaccaccaggaggctaatgtatgaagaagaaaacaaatag
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