Candidatus Pelagibacter giovannonii: E5R92_03025
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Entry
E5R92_03025 CDS
T06537
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
peg
Candidatus Pelagibacter giovannonii
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peg03009
]
E5R92_03025
Enzymes [BR:
peg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
E5R92_03025
Ribosome biogenesis [BR:
peg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E5R92_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ArlS_N
Motif
Other DBs
NCBI-ProteinID:
QIZ20757
UniProt:
A0A6H1Q1G4
LinkDB
All DBs
Position
546637..547617
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AA seq
326 aa
AA seq
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MEKNINLIVGEDENNIRLDVFINKRESLISRTRIKNLILKEKLKINNQIINSPSKKVLFG
DEIDLQIPEPKEASLKPYNFKLQIIYEDDDLLIINKPAGIIMHPGAGNYDETIVNALMHY
NKDSLSTIGDELRPGIVHRIDKDTSGLIVIAKNNETHENLSHQFSEHTITRVYQLLIWGK
LRPSSGKIDTFITRSSKNRQMMEVSNSKGKRAITNYKTIEIFENDKTPTLSLVECRLETG
RTHQIRVHMTHMGNSIMGDGKYKKKYKKLKNIDTNLENLIYKLDRQFLHAQTLGFIHPRT
NEEMTFTSILPQELENILVLLRNIGK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacattaatttaatagttggagaagatgaaaataatatcagacttgatgta
ttcatcaataaaagagagagtttaattagtagaactagaattaagaatttaattcttaaa
gaaaaattaaaaataaataatcagattattaatagtccatcaaaaaaagtactgtttgga
gatgagatagatcttcaaattccagaacctaaagaagcatccttaaagccatataatttt
aaattacaaattatttatgaagacgatgatttactaataatcaacaagccagcaggcata
attatgcacccaggtgcaggaaattatgatgaaacaattgttaacgccttaatgcattat
aacaaagactccttatcaacaataggtgacgaactaagacctggcatagttcataggatt
gataaagatacgtcaggattaatagttattgcaaaaaataatgagacacacgaaaactta
tcacatcaatttagtgaacacacaattacgagagtttatcagctcttaatttggggaaag
cttagaccttcatctggaaaaattgatacgtttataactagaagctcaaaaaatagacag
atgatggaagttagtaattctaaaggcaaaagagcaatcacaaattacaaaacaattgag
atttttgaaaatgataaaactcctacattaagcttagtggaatgtagattagaaactgga
agaacacatcaaataagagttcacatgacacatatgggtaatagtattatgggtgatggc
aaatataaaaagaaatataaaaaacttaaaaatattgacactaatttggaaaacttaatt
tataaattagatagacaatttctacatgctcaaacattggggtttattcaccccagaact
aatgaggagatgacttttacctcaattttgccacaagaacttgaaaatattttagtattg
cttagaaatattggcaaataa
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