Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00554
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Entry
SAR11G3_00554 CDS
T01465
Name
(GenBank) uracil-DNA glycosylase, family 5
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAR11G3_00554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_00554
Enzymes [BR:
pel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAR11G3_00554
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAR11G3_00554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEA81029
UniProt:
F2I3Z1
LinkDB
All DBs
Position
complement(492002..492682)
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AA seq
226 aa
AA seq
DB search
MKISLDNLNQTITNCSKCPRLVAFRKKISKEKRKQYRNQIYWGKPTPGFGDKKSKIIIFG
LAPAAHGATRTGRVFTGDKSGDLLFKCLYKAGLSNQSTSTDINDGLKLSCFITNVLKCVP
PGDKPELKELLNCSKFLEGELHILREAKILVTIGKVAFDEILKFYQRKYSLDKKNYIFGH
GKKYKLPDGKLLVSSYHTSPRNFNTGLINERKITNLFKLVKKLKIN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagtttagataatttaaatcaaacaattaccaattgttctaagtgcccgaga
ttagttgcttttagaaaaaaaatttcaaaagaaaaaaggaaacaataccgtaatcaaatc
tactgggggaaacctactcctggatttggcgataaaaaatcaaaaataatcatttttggt
ctcgcgccagcagctcacggagctactagaacgggccgtgtatttacaggagataaatca
ggagatcttctgtttaagtgcctttacaaagcgggtctatctaatcagtcaacctctact
gatattaacgatggtttaaaactatcctgctttataaccaatgttttaaaatgtgtgcct
ccaggagataagccagaattaaaagaattattaaactgttctaagtttttggaaggagaa
ctacatatcctaagagaggccaaaattttggttacaattggtaaagtggcttttgatgaa
atattaaaattttatcaaaggaagtattcgcttgataaaaaaaattatatttttggtcat
ggtaaaaaatataaacttccagatgggaagttgttggtaagctcttaccacacctctcca
agaaattttaatacaggcttaataaatgaaaggaaaattacaaatctttttaaattagta
aaaaaattaaaaattaattag
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