Pseudomonas entomophila: PSEEN4296
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Entry
PSEEN4296 CDS
T00362
Symbol
algU
Name
(GenBank) sigma factor AlgU
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pen03021
]
PSEEN4296 (algU)
Transcription machinery [BR:
pen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSEEN4296 (algU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
CAK16983
UniProt:
Q1I5V2
LinkDB
All DBs
Position
complement(4581731..4582312)
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AA seq
193 aa
AA seq
DB search
MLTQEEDQQLVERVQRGDRRAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR
ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE
RSLLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE
AIDKALQPLLQES
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccaggaagaggatcagcagcttgtcgagcgcgtgcagcgcggcgacaggcga
gcgttcgatctgttggtgttgaagtaccagcacaagattctcgggttgatcgtgcgtttt
gtccacgacacccatgaagcgcaagacgtggcgcaggaagcctttatcaaggcgtaccgg
gcgctcggtaattttcgcggtgacagtgcgttctatacctggctgtaccgcatcgccatc
aacacggcgaagaactatctggtgtcccgtggaaggcggccacctgacagcgatgtgagc
tccgaggatgcggagttttacgacggcgatcatggtctcaaggatctcgagtccccagag
cgctcgttgttgcgggatgaaatcgaaggcactgtccatcgcaccatccagcaactgccg
gaagatttgcgcacggcactgaccctgcgtgagttcgatggtctgagttacgaagacatt
gccagcgtcatgcaatgtccggtgggtaccgtgcgctctcgaatttttcgcgctcgggag
gccatagataaagccctgcaaccgttgttgcaggaatcctga
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integrated database retrieval system
