Phalaenopsis equestris: 110023730
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Entry
110023730 CDS
T05601
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
peq
Phalaenopsis equestris
Pathway
peq03020
RNA polymerase
peq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110023730
09124 Replication and repair
03420 Nucleotide excision repair
110023730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peq03021
]
110023730
03400 DNA repair and recombination proteins [BR:
peq03400
]
110023730
Enzymes [BR:
peq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110023730
Transcription machinery [BR:
peq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110023730
DNA repair and recombination proteins [BR:
peq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110023730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110023730
NCBI-ProteinID:
XP_020578945
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MDGADDYMMEVDDEEEITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVDESAD
IEIRPESQHNPGRQSDFVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSA
PLYVDVTKKIIKKGHDCEEVTETQEFTKVFIGKVPVMLRSTYCTLFQNSEKDLTELGECP
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFV
RMLSRTSAKGGNSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMME
LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCET
KKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYV
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLS
HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHP
ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEV
GVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIIALQQRETPEEGWHDLVAKGF
IEYIDTEEEETTMISMTINDLVNGRQNPEGAYAETYTHCEIHPSLILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
AIVAITCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDEAQGAASRYTQRDHSTSLRHS
ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
QMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC
KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKEEKVPRKRRKDSE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcggatgactacatgatggaggtggacgatgaggaggaaattacccaggag
gacgcttgggcggtgatcagcgcctacttcgaagacaagggtcttgtgaggcagcagctc
gactcgttcgacgagttcatccagaacactatgcaggagattgtggacgagtctgctgac
atcgagattcggcctgagtcgcaacataatcctggccgccaatcggacttcgtcgagacg
atttacaaaattagctttggtcaaatatatttgagtagacccatgatgacagagtcagat
ggagaaactgctacattatttccaaaggctgcaaggttaagaaatctaacttattcagca
cctttgtatgtggatgtcactaaaaagattataaagaaggggcatgattgtgaagaagtt
accgagacacaggagttcacaaaagttttcattggaaaggttcccgttatgttaagatct
acttattgcacactttttcaaaattctgaaaaggatttgacagaattgggagaatgccct
tatgatcaaggtggatatttcattatcaatggtagtgagaaggttttgattgctcaagaa
aagatgagcaccaaccatgtttatgtatttaagaaacggcaaccaaataaatttgcttat
gttgctgaagtccggtctatggctgagagccagaacagaccggcaagcagcatgtttgtg
cgaatgctgtcaagaactagcgccaaaggaggaaattctgggcaatatatccgcgcgaca
cttccatacatccgggctgatatccctataattatagtattccgtgcattagggtttgtt
gccgacaaggatattcttgaacatatatgctatgacttctccgatacccaaatgatggaa
ttgttacggccatctcttgaagaagcatttgttattcagaatcaacaggtggcattggat
tacatagggaagcgaggggctactgttggtgttacaagagaaaagagaataaagtatgca
aaagaaattcttcaaaaagaaatgcttccacatgttggcatcggagagtattgtgaaaca
aaaaaagcttactattttggatatattattcacaggttgttattatgtgcccttggtcga
agaccagaagatgatagggatcattatggcaataaaagactggatctagcaggcccttta
cttggtggcttgttcagaatgctgtttagaaaattaacacgggatgtgagatcctatgtt
caaaagtgtgttgataatggaaaagatgtaaatttgcaatttgcgatcaaagcaaaaacc
ataacaagtggtctgaagtattcccttgctactggaaattggggtcaagcaaaccaagct
ggcactcgagcaggggtctcacaggtgctgaatcgcctcacttatgcatctactttgtca
cacttaagaagattaaactctcctataggacgtgaaggaaaattggcaaaaccacgacaa
ctgcacaattctcattggggaatgatgtgccctgctgaaacacctgaaggacaagcttgt
ggtttggtgaagaaccttgctttaatggtgtatattacagtagggtcagctgctcatcct
atactagaattcttggaggagtggagtactgaaaactttgaggaaatttctccagctgta
attccacaagcaactaaaatttttgttaatggttgctgggttggaattcatcggaatcct
gacctccttgtgaagaccttaaggcagctaagaagacagattgatgtcaatactgaagtg
ggggttattcgagatatacgtcttaaagaattgcgtctttatacggactatggtcgttgt
agtcgcccattattcattgttgaaaagcaaaggctgctgataaagaagaaggacattata
gccctgcaacaacgggaaaccccagaagaaggctggcatgatcttgttgcaaaaggattt
atcgaatacatagacactgaggaagaagaaaccactatgatttccatgaccattaatgat
cttgtgaatggtaggcagaatcctgagggggcatatgcggaaacatacacccattgtgaa
atacatccatctctaattctaggcgtttgtgcatccattatcccttttcctgatcacaac
cagtcgcctcgtaacacatatcagtcagctatgggcaagcaggcgatggggatttatgta
accaactaccagttacgaatggatactctagcctatgtcctctactatccacagaagccg
cttgttacaacccgtgccatggaacacttgcacttccgacagttgcctgctggaattaat
gccattgttgcaatcacttgctactcagggtataaccaagaggactctgttataatgaat
caatcttcgatagatcgagggttctttagatcgttattctttcgttcttacagagacgag
gaaaagaagatgggcacccttgtgaaagaagagtttgggcgtccaaacagagaaaatact
atgggtatgagacatgggtcctatgataaattagatgatgatggtctcgcccctcccggg
acgagagtctctggcgaagatgtcattattgggaaaacttctccaatcgctcaagatgaa
gctcagggagcagcttcaaggtatacacaacgtgatcatagtactagcttacgccatagt
gaaagcgggatggtggatcaggttttattaactacaaatgctgatggtctgaggtttgtg
aaagttagaatgagatccgtccgtattcctcagattggagataaatttagtagcaggcat
ggtcaaaagggaactgttggtatgacttatactcaggaagatatgccatggactgttgaa
ggcattacgcctgatattattgtgaatccacatgccattccctctcggatgactatcggt
caacttatcgagtgtatcatgggaaaggttgctgcccatatggggaaagaaggcgatgcc
actccgttcacagatgtcacggtcgataatatcagcaaagctctgcataaatgtggatat
cagatgcgtggatttgaaacgatgtacaacgggcacactggtcgaaaattgagcgccatg
atattcctcggccccacctattatcagcgccttaaacacatggtggatgacaagatccac
tcgagagggcgtggccccgtacagatccttacgaggcagcctgctgaaggccgttctcgc
gatggtggtttgcgtttcggagaaatggaacgagactgcatgattgctcacggcgccgct
cacttccttaaggagaggttgttcgatcaaagcgatgcatatagagttcatgtctgcgag
agatgcgggctcatagccatcgccaatctgaagaagaattctttcgagtgtagaggttgc
aagaacaagactgacattgttcaagtgcacataccatacgcctgcaagctgctcttccaa
gagctcatgtctatggccattgcccccagaatgctcaccaaggaagaaaaagttcccaga
aaacgaagaaaagattctgagtga
DBGET
integrated database retrieval system
