Populus euphratica (Euphrates poplar): 105107264
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Entry
105107264 CDS
T05872
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03022
Basal transcription factors
peu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105107264
09124 Replication and repair
03420 Nucleotide excision repair
105107264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105107264
03400 DNA repair and recombination proteins [BR:
peu03400
]
105107264
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105107264
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105107264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Tfb4
Motif
Other DBs
NCBI-GeneID:
105107264
NCBI-ProteinID:
XP_010999431
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MTNNIAEKRRQQEEEDDEEDGDLDGWGERNYADERSWEALQEDESGLLRPLDNKAMYHAQ
YRRRLRSLSTASNSQRIQKGLIRFLYIVLDLSRAASVMDFRPSRMAVVAQNVEAFIREFF
DQNPLSQIALVTIKDGVAYSLTELGGSPESHIKALMAKLECSGDSSLQNALELVHEYLDK
IPSYGNREVLILYSALTTCDPGDIMETIQKCKKSKMRCSVIGLSAEMFICKHLCQETGGL
YSVALDESHFRELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSISICSCHKESKVGEG
YICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVKPSRQNELHRRSHK
TCFGCQQSLVNPGNKPSLQVACPKCKQYFCLDCDIYIHESLHNCPGCESLRAS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaacattgctgaaaaaagaagacagcaagaagaagaagacgatgaagaagat
ggtgatcttgacggttggggagagagaaattatgctgatgagagatcttgggaagcttta
caagaggatgagtctgggctccttcgtcctttggataacaaagcgatgtaccatgctcaa
tatcgccgtcgtcttcgttctctttctactgcttctaattcccagcgtattcagaaaggg
ctcattcgttttctctacattgtcctagatctctcaagggcagcatcagtgatggatttt
cgaccaagcagaatggctgtggttgcgcaaaatgttgaggcgtttataagggagtttttt
gatcagaatccacttagtcagattgctttggtcactataaaagatggggttgcttattct
ttaacggagcttggtgggagtcctgagtctcatattaaggctttgatggctaagttggaa
tgttcaggtgattcgtcactacagaatgcactggagcttgttcatgagtatcttgataaa
attccatcatatggtaatcgtgaagttctcatcttatattctgctcttacgacctgtgat
ccgggagatataatggagacaatccagaaatgcaagaagtctaaaatgagatgctcagtt
attggcctctctgctgaaatgttcatatgcaagcatctctgccaagaaactggtggattg
tactctgttgctttggatgagagccactttagagagttaatattggagcatgcaccccct
cctccggcaatagcagaatttgcaatagctaacttgatcaagatgggtttcccacaaaga
gcagcagagggttccatctcgatatgttcttgtcataaagaatcgaaagttggtgagggg
tatatttgtccaagatgtaaagcgcgtgtgtgtgaacttcctactgaatgccgtatttgt
gggttgacacttgtttcttcaccccatttagcaaggtcgtaccatcatctctttcccata
gcaccatttgatgaggtgaaaccatcacgtcaaaatgaactacatcgtagatcacataaa
acttgttttggttgccaacaaagccttgtcaatcctggcaataaacccagccttcaagtt
gcttgtccaaaatgcaaacagtacttttgccttgactgtgacatttatattcatgagagc
ctgcacaattgcccaggttgcgagagccttagagcttcatag
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