Populus euphratica (Euphrates poplar): 105125606
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Entry
105125606 CDS
T05872
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peu03016
]
105125606
Enzymes [BR:
peu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
105125606
Transfer RNA biogenesis [BR:
peu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105125606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
105125606
NCBI-ProteinID:
XP_011024424
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MSLTSTPARLTLLALLSATTIYCFCKSRRLKKISLKPNPNPNKPKLFFISQTGTSKTLAH
RLHNLLASNNLHFDLIDPQNYEPEDLFKEKLVIIIASTWEDGKPPQNAKFFANWLAESAD
DFRVGSLMLSECKFAVFGVGSRAFGETFNAVAKDFSRRLRDLGAKEVVGVGEGDVDGGEL
DGVFEEWSGRLARVLKGESVENGEVCGNGLVVIDESDDDEDDGGVESDIIDLEDIAGKGP
SRRSIVVDQSNGKLNGENGKLNGQKEMVTPVIRASLEKQGYKIIGSHSGVKICRWTKSQL
RGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWKMDDPLEIVNS
AIDLHTKMIKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINTLVDELHRRQIST
FLVTNAQFPEKIQMLKPVTQLYVSVDAATKESLKAIDRPLFGDFWERFIDSLKSLNEKQQ
RTVYRLTLVKGWNTEDVDAYFNLFSVGQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVK
AFSEALAFKSKGEYEVACEHVHSCCVLLAKTEKFKVDGQWFTWIDYDKFHDLVASGKPFD
SKDYMAATPSWAVYGAEEGGFDPDQSRYRKERHHKTNH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaacctccactcccgctcgcttaactctccttgctctcctctccgccaccaca
atctactgcttctgcaaatctcgccgcctcaaaaaaatctccctaaagcctaaccctaac
cctaacaaacccaaactcttcttcatctcccaaactggcacttccaaaaccctagctcat
cgtctccacaatctcctagcctcaaacaatctccattttgacctcatcgaccctcagaat
tacgagcctgaggacctcttcaaagaaaaattggtcataatcatcgcttccacttgggaa
gatggtaaaccgcctcaaaatgccaaattcttcgcgaattggcttgctgaaagcgctgac
gactttcgtgtcggttcgttgatgctctcggaatgcaagttcgcggtttttggtgttgga
agtagagcttttggcgagacatttaatgccgtggctaaagatttttcgcggcggttgagg
gatttgggagcgaaggaggttgtgggagttggggagggtgatgtggatggtggtgaattg
gatggggtttttgaggagtggagtgggagattagctagggttttgaaaggagagagtgtg
gagaatggagaggtttgtggaaatggactggttgttattgatgagagcgatgacgatgag
gacgatggtggggtggagtcggacattattgatcttgaagatattgcgggtaaagggccg
tcaaggaggtcaattgtcgtggatcaaagtaatgggaaattaaatggagagaatgggaaa
ttgaatggtcaaaaagaaatggtgactccggtgatcagagcaagcttagaaaagcaggga
tacaaaatcattggttcgcatagtggtgttaagatttgtagatggaccaaatcacagctt
agagggcgaggaggatgctacaagcactctttttatggaatcgaaagtcataggtgcatg
gagacaactcctagtttggcatgcgccaacaaatgtgttttctgttggagacatcacaca
aatcctgtgggaaagagttggcagtggaaaatggatgatcctctggagattgtgaattct
gccattgatctgcatacaaagatgattaagcaaatgaaaggagttcctggtgttactctt
gagcgattgaatgaaggtctctctcccaggcattgtgctttatcacttgttggtgaacct
attatgtatccggagattaatacactagtggatgagctgcaccgaaggcagatatccacg
tttctagtaacaaatgcacagttccctgagaagattcaaatgctgaagcctgtaacccag
ttatatgtcagtgtagatgctgcaacaaaggaaagcctgaaggcaattgatagaccactt
tttggtgatttttgggagcgatttattgattctttgaaatccctcaatgagaagcaacaa
cggactgtttatcgtctgacactggttaaagggtggaacacagaggatgtagatgcttat
tttaacctctttagcgtcggacagcctgatttcattgaaatcaaaggcgttacctactgt
ggatcgtctgccacatcaaagttgacaatggagaatgtgccttggcattctgatgtgaaa
gctttctcagaggccttggcttttaaaagcaaaggggaatatgaggttgcttgtgagcat
gtccattcatgttgtgtccttttggcaaaaactgagaagttcaaagttgatggccaatgg
ttcacttggatagattatgacaagttccatgatctggttgcttctggtaaacctttcgat
agcaaggactacatggctgccacaccatcttgggctgtttatggagctgaagaaggtgga
tttgatccggatcaatctcggtataggaaagagagacatcataaaaccaaccactga
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