Paraburkholderia edwinii: KZJ38_06485
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Entry
KZJ38_06485 CDS
T07588
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pew
Paraburkholderia edwinii
Pathway
pew00540
Lipopolysaccharide biosynthesis
pew01100
Metabolic pathways
pew01250
Biosynthesis of nucleotide sugars
Module
pew_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KZJ38_06485 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pew01005
]
KZJ38_06485 (rfaD)
Enzymes [BR:
pew01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KZJ38_06485 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pew01005
]
Core region
KZJ38_06485 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QYD69971
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Position
1:1480314..1481306
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGSNIVKALNERGEHRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFIER
FARGDFGKVRAVFHEGACSDTMEHNGRYMMDNNFRYSRAVLDACLAQGVQFLYASSAATY
GGSDRFVEDREFERPLNVYGYSKFLFDQVIRRVLPTAKTQIAGFRYFNVYGPRESHKERM
ASVAFHNFNQFRAEGKVKLFGEYNGYAAGQQTRDFVSVEDVAKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIASTVVNTLRVLKHEPALSLAEQVQRGLIEYVPFPDALRGKYQCFTQADL
TKLRAAGYDAPFLTVQEGVDRYVRWLFGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatcgtcaccggcgcggccggctttatcggcagcaatatcgtcaaggcgctt
aacgagcgcggcgaacaccggatcatcgccgtcgataacctgacgcgtgcagacaaattt
aagaatctcgtcgactgcgagatcgacgactatctcgacaagaccgaattcatcgaacgc
ttcgcgcgcggcgatttcggcaaggtgcgcgcggtgttccacgaaggcgcgtgctccgac
acgatggagcacaacggccgctacatgatggacaacaacttccgctacagccgcgccgtg
ctcgacgcgtgcctcgcgcaaggcgttcagttcctctatgcatcgtcggcggcgacatac
ggcgggtcggaccggtttgtcgaagaccgcgagttcgagcggccgctcaacgtgtacggc
tactcgaagttcctgttcgatcaggtgattcgccgcgtgttgccgacggcaaagacgcag
atcgcgggctttcgctacttcaacgtgtacgggccgcgcgagtcgcacaaggaacgcatg
gcctcggtcgcgttccacaacttcaaccagtttcgcgcggaaggcaaggtcaagctcttc
ggcgaatacaacggttatgcggccggccagcagacgcgcgacttcgtttcggtcgaagac
gttgccaaggtcaacctgttcttcttcgatcacccggagaagtcgggcattttcaatctc
ggcaccggccgtgcgcagccgttcaacgatatcgcgtcgacggtcgtcaacacgctgcgc
gtgctgaagcacgaaccggcgttgtcgcttgccgagcaggtgcagcgcgggctgattgag
tacgtgccgttccccgacgcgttgcgcggcaaatatcagtgcttcacgcaggcagacttg
acgaagctgcgcgcggccggctacgacgcgccgtttctgaccgtgcaggaaggcgtcgat
cgttacgtgcgctggctattcggccaggtgtaa
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